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Name : lysS (B186_112) Accession : YP_006607998.1 Strain : Candidatus Portiera aleyrodidarum BT-B Genome accession: NC_018507 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 119743 - 121233 bp Length : 1491 bp Strand : + Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGATTATAAAAAATTATTTAATTAAAGATCGTTTAAATAAGTTACAAGTATTGAGTAAAACCGCGAATAAAGCTGGAAA AAGTGCATTTTATAATAAATTTCGTCGTACTAGTTTAGCAAAAAGTTTAAAAAAAATTTTTGGAGAAAAGAATAAAAAAC AATTGGTTAATTTAAAGTTAACAACAGCAGTTGCAGGACGTATTATGCGTAAAAGGGGGCCTTTTATAGTTGTTCAAGAT GTAAGTAGTAACATTCAGCTTTATATAGATAAAAAAACAATTTCTAATGAAATTCATAAATATATAAAAGATTGGGATAT TGGAGATATAATTGGAGCAATAGGTGACATTGATAAATCAAAAATTGGTGAACTATATTTATTGGTTAAAAAAGCTTATA TTTTAACTAAAAGCATAAGACCTTTACCAAGTAAATTTCACGGTATAAAAGATCAAGAAATTAGATATAGGCACAGATAT TTAGATTTTATTATGAATAAAGAGGTACGTAAATCGTTTAAAATTCGCACACGTATTATATCGGCGCTTAGAAATTTTTT TTATGAACTTTATTTTTTAGAAGCAGAGACTCCTATATTACATTCAATGCCAGGGGGAGCAATAGCAAAACCTTTTGAAA CTTATAATTATTCATTAAATATAAAATTGTATTTACGAATCGCCCCTGAACTTTATTTAAAAAGGTTAGTTGTTGGTGGT TTTGAACGTGTATTTGAAATAAATAAAAACTTTCGTAATGAAGGCCTTTCAACTTGGCATAATCCTGAATTTACTATGTT AGAATTTTATTGGGCTTTTGCGACTTATAAGGATTTGATGGAAATCACAGAACATATGATAAGATTTGTTGCGAATGAAG CGTTAGGTACAACAATTATTAACATCGGAAAGATTTTAAACATTGATTTATCAGAACCTTTTGATTGTTTAAGTATGCGA GACTCGCTCATTAAGTATGGTAAAACTTTTTCAATTAATAACTCTGATTTTTATGATCTAGAAAATTTGCTTTTTTTATC TAAACGAATTGGATTGACCGTAGCTAACTATAACAATTATGGAAATTTACTTAATAAACTATTTGAAGTAATTGTAGAAC GAAAATTAATTAAACCAACTTTTGTCACAGACTATCCAGTAGAAGTTAGTCCTTTAGCAAGAAGTAAAGATAGTAACCTG AATATAACAGAAAGATTTGAATTGTTTATAGGGGGTAGAGAAATAGCTAATGGTTTTTCGGAATTAAATGATTATATAGA ACAATCTAACCGATTTTATTTGCAATTGAGAAACAAATATACTTATGATTTGAGTAATTTTGATATGGACTATATACGTG CCTTAGAATATGGAATGCCTCCAACTGCTGGAGAAGGAGTAGGAATTGATCGTCTTGTTATGATACTTACAAATAAAGAT TCAATTCGAGATGTATTACTTTTTCCTTTGCTGCGTAGCCGTAAAGTTTAA Protein sequence : MIIKNYLIKDRLNKLQVLSKTANKAGKSAFYNKFRRTSLAKSLKKIFGEKNKKQLVNLKLTTAVAGRIMRKRGPFIVVQD VSSNIQLYIDKKTISNEIHKYIKDWDIGDIIGAIGDIDKSKIGELYLLVKKAYILTKSIRPLPSKFHGIKDQEIRYRHRY LDFIMNKEVRKSFKIRTRIISALRNFFYELYFLEAETPILHSMPGGAIAKPFETYNYSLNIKLYLRIAPELYLKRLVVGG FERVFEINKNFRNEGLSTWHNPEFTMLEFYWAFATYKDLMEITEHMIRFVANEALGTTIINIGKILNIDLSEPFDCLSMR DSLIKYGKTFSINNSDFYDLENLLFLSKRIGLTVANYNNYGNLLNKLFEVIVERKLIKPTFVTDYPVEVSPLARSKDSNL NITERFELFIGGREIANGFSELNDYIEQSNRFYLQLRNKYTYDLSNFDMDYIRALEYGMPPTAGEGVGIDRLVMILTNKD SIRDVLLFPLLRSRKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 3e-94 | 47 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 3e-61 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_006607998.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-94 | 47 |
