Gene Information

Name : BCK_18620 (BCK_18620)
Accession : YP_006597819.1
Strain : Bacillus cereus FRI-35
Genome accession: NC_018491
Putative virulence/resistance : Virulence
Product : thiol-activated cytolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3653500 - 3655038 bp
Length : 1539 bp
Strand : +
Note : -

DNA sequence :
GTGATTTTTCTGAATATTAAGAAAAATACCAAAAGAAGAAAGTTCCTTGCATGTTTATTAGTTAGTCTATGCACTCTTAA
TTATTCATCTATTTCTTTCGCAGAAACACAAGCCGGTCGTGCAACTGATATAGCTAAAAATGCTAGTAGCATTGATACTG
GTATAGCAAACCTTACATATAATAATCAAGAGGTTTTAGCTGTAAATGGTGATAAAGTAGAGAGTTTTGTTCCGAAAGAA
AGTATCAATTCAAATGGTAAATTTGTAGTAGTGGAACGTGAGAAAAAATCACTTACAACGTCACCAGTCGATATTTCGAT
TATTGATTCTGTAGCAAATCGCACGTATCCAGGAGCTGTACAACTTGCCAATAAAGCTTTTGCAGACAATCAACCGAGTT
TATTAGTGGCTAAGAGAAAGCCTTTGAATATTAGTATAGACTTACCTGGTATGAGAAAAGAAAATACAATCACTGTCCAA
AATCCGACATATGGTAATGTAGCTGGAGCAGTAGATGATTTAGTATCTACTTGGAATGAAAAGTATTCCGCAACACATAC
GTTACCTGCAAGAATGCAGTATACAGAATCTATGGTTTATAGTAAATCACAAATCGCAAGTGCTCTTAATGTTAATGCGA
AATATCTTGATAACAGTCTGAACATTGATTTTAATGCAGTTGCAAATGGAGAGAAAAAAGTGATGGTGGCGGCATATAAG
CAAATATTCTATACCGTAAGTGCTGAACTACCTAACAATCCATCCGATCTATTTGATAATAGTGTTACTTTTGATGAGCT
AACTCGTAAAGGAGTAAGTAATTCAGCACCACCTGTTATGGTCTCAAATGTAGCTTATGGCAGAACGGTTTATGTAAAAT
TAGAAACAACATCTAAGAGTAAAGATGTACAAGCTGCTTTTAAAGCTTTACTTAAGAATAACAGTGTCGAAACGAGTGGA
CAGTACAAAGATATTTTTGAAGAAAGTACCTTTACTGCGGTCGTATTAGGCGGAGATGCGAAAGAGCATAACAAGGTTGT
TACAAAAGATTTCAATGAAATTCGAAATATTATTAAAGATAATGCTGAATTAAGTTTTAAAAATCCAGCATACCCAATTT
CATATACAAGCACTTTCTTAAAAGATAATGCAACTGCTGCTGTTCATAACAATACAGATTATATCGAGACGACAACGACA
GAATATTCAAGTGCAAAAATGACACTTGATCATTACGGTGCATATGTTGCTCAATTTGATGTATCTTGGGATGAATTCAC
ATTTGATCAAAATGGAAAAGAAGTATTAACACATAAAACATGGGAAGGTAGTGGCAAAGACAAAACAGCTCATTACTCTA
CAGTAATCCCTCTTCCGCCAAATTCAAAAAATATAAAAATTGTAGCAAGAGAATGTACAGGTCTTGCATGGGAATGGTGG
AGAACCATTATTAATGAACAAAATGTTCCATTAACAAATGAAATAAAGGTTTCAATTGGAGGAACAACATTATATCCAAC
TGCTACTATTAGTCATTAG

Protein sequence :
MIFLNIKKNTKRRKFLACLLVSLCTLNYSSISFAETQAGRATDIAKNASSIDTGIANLTYNNQEVLAVNGDKVESFVPKE
SINSNGKFVVVEREKKSLTTSPVDISIIDSVANRTYPGAVQLANKAFADNQPSLLVAKRKPLNISIDLPGMRKENTITVQ
NPTYGNVAGAVDDLVSTWNEKYSATHTLPARMQYTESMVYSKSQIASALNVNAKYLDNSLNIDFNAVANGEKKVMVAAYK
QIFYTVSAELPNNPSDLFDNSVTFDELTRKGVSNSAPPVMVSNVAYGRTVYVKLETTSKSKDVQAAFKALLKNNSVETSG
QYKDIFEESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSFKNPAYPISYTSTFLKDNATAAVHNNTDYIETTTT
EYSSAKMTLDHYGAYVAQFDVSWDEFTFDQNGKEVLTHKTWEGSGKDKTAHYSTVIPLPPNSKNIKIVARECTGLAWEWW
RTIINEQNVPLTNEIKVSIGGTTLYPTATISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 4e-151 63
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 2e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BCK_18620 YP_006597819.1 thiol-activated cytolysin VFG2275 Protein 2e-175 71
BCK_18620 YP_006597819.1 thiol-activated cytolysin VFG0976 Protein 1e-151 63
BCK_18620 YP_006597819.1 thiol-activated cytolysin VFG1363 Protein 3e-102 43
BCK_18620 YP_006597819.1 thiol-activated cytolysin VFG0074 Protein 2e-101 43