Gene Information

Name : BN69_2394 (BN69_2394)
Accession : YP_006592496.1
Strain : Methylocystis sp. SC2
Genome accession: NC_018485
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2456819 - 2458096 bp
Length : 1278 bp
Strand : -
Note : -

DNA sequence :
ATGCATCTTGAAAACGAAACGATAGCCGTCGTCGGACTTGGCTACGTCGGACTGCCCATCGCCGTGGAATTCGGTAAAAT
TCGTCCTGTCGTGGGCTTCGACATTCAGCCCCATCGCATCGCTGAACTCCGTTCAGGCCATGACAGCACTCGCGAGGTTG
AGTGTAGCGAATTGGCGGGCGCCCAGCACCTGACCTATACTTCAGATCCCAATGACATGAAATGCTGCCGCATTTTCATC
GTGGCGGTCCCTACGCCCGTCGATCAGGCCCAACGTCCTGACATGACCCTACTCAAAAAGGCTTCCGATACGGTTGGACG
CGTCATGGAAAGGGGAAGCATCGTCGTCTTCGAATCGACTGTATACCCAGGATGCACGCGCGAGATTTGCGTGCCAATCC
TTGAAGCCACTTCCGGCCTCGCCTTCAACAAGGACTTCTTCGTCGGCTATAGTCCCGAGCGCATCAACCCCGGTGACAAA
ATGCACCGTCTGCCGACAATCACCAAAGTGACAAGCGGCTCGACGCCGGAAGCGGCCGACGCCGTGGATGCTCTTTACAA
ATCCATTGTCGTCGCCGGCACGCACAAAGCGAGCTCCATCGAAGTCGCTGAAGCGGCTAAAGTGATTGAGAACACTCAGC
GCGACCTCAACATCGCCTTGATGAACGAACTCGCGATCATTTTTCACAAGCTTGGCATCGACACACAAGACGTTCTGGCT
GCGGCGGGAACCAAATGGAACTTCCTCCGGTTCACGCCGGGCCTGGTCGGCGGTCACTGCATCGGCGTCGACCCTTATTA
TTTGACGCACCGCGCCCAGGAGGTCGGCTACCATCCTGAAGTCATCCTCGCAGGGCGACGCATTAACGACAGAATGGGCC
CTTATGTCGCCGACAGGGTTGCGCGTCTAATGATGCGCAACCAATTTCCTGTCGTCGGGAGCCGCATTTTGGTGATGGGC
CTGACATTCAAGGAAAACTGCCCTGATTTGAGGAACTCCAAGGTTGTCGACGTTATCGAATCTCTAAGGGAGTTTCATGC
GGAGGTTGACGTCTTCGACCCGTGGGCGAACGCGGAGGAAGCCGAACATGAGACGGGCGTCAAGCTAATCACATCGCTGC
CGGACGGCATGCTTTACGACGCCATTATTGTCACAACCGCGCATAAAGAGTTCATCGAAATGGGCCCGAAGCGGCTGCGG
GCGCTAGGCAAACCTCGAGCAATTCTTTTCGACACTAAAGGGATTTTCGCGCGCGCCGAAAGCGACGGGAGACTATGA

Protein sequence :
MHLENETIAVVGLGYVGLPIAVEFGKIRPVVGFDIQPHRIAELRSGHDSTREVECSELAGAQHLTYTSDPNDMKCCRIFI
VAVPTPVDQAQRPDMTLLKKASDTVGRVMERGSIVVFESTVYPGCTREICVPILEATSGLAFNKDFFVGYSPERINPGDK
MHRLPTITKVTSGSTPEAADAVDALYKSIVVAGTHKASSIEVAEAAKVIENTQRDLNIALMNELAIIFHKLGIDTQDVLA
AAGTKWNFLRFTPGLVGGHCIGVDPYYLTHRAQEVGYHPEVILAGRRINDRMGPYVADRVARLMMRNQFPVVGSRILVMG
LTFKENCPDLRNSKVVDVIESLREFHAEVDVFDPWANAEEAEHETGVKLITSLPDGMLYDAIIVTTAHKEFIEMGPKRLR
ALGKPRAILFDTKGIFARAESDGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-109 58
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-124 57
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-124 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN69_2394 YP_006592496.1 polysaccharide biosynthesis protein VFG0431 Protein 1e-124 57