Gene Information

Name : BN69_1526 (BN69_1526)
Accession : YP_006591628.1
Strain : Methylocystis sp. SC2
Genome accession: NC_018485
Putative virulence/resistance : Virulence
Product : general secretion pathway protein E, type II secretion system ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1592833 - 1594584 bp
Length : 1752 bp
Strand : +
Note : -

DNA sequence :
ATGGAGTCGCAAACGGAAAGCGGAAGTTCGGCTCGCGGCGACCGAGCGGCGTGGCCGGACGTCAACAGTCCGCATTTCGC
GACGAGCTTCGCCGCTTTTCTTCTCGCGCAAAACGCCATCGACGACCTGGCGTTGCAGCGCTCTCTGAGAGCGGCCACGC
AGAGCGGCGAACGCTTCGACCATGTGTTGACCAAGCTCGGGCTCGTTTCGGAAGCCGATCTATGTTCGCACCTCAGCAAA
TTCCTGAAAATACCGCAGCTCCGCGCTGCGGACATGCCGCTCGAGCCGCCCTTGCGCGAGGAAATTCCCGAAAAATTCAT
CCACGCCAATCGGCTGTTGCCGCTGTCCCTCGACGGACAACGGCTGAAACTCGCGGTCGCCGATCCACTCGACCTCGAAC
CGGTGCGGGCGCTGGCCTATTCGACGGGTTACGACATCGACCTCCTCATCATCTCGCCGGCGCAGTTCGAGAAGGCTTGG
TCCGCGCTCTATGGCGCGCGTCAGGACGGCGCGCCTATTCTCGACAACGACCTGCGCGCCAACGACGCGAGCGAATTTGA
CCTGCAGCGCTTGCGCGACATCGCAAATGAAGCCCCCGTTGTCCGACGCGTCAATCAGATCATCGCCGACGCGATCGAAG
CGCGCGCTTCCGACATTCACATCGAACCCTCGCTTGAAGCCGTGCAGGTTCGCTACAGGATCGACGGCGCGCTGCGCGCC
GCCGAGACGCTGCCTCCGGGGCTGAAGGCCGCGGTCGCCTCGCGCATCAAAATCATGGCGCGCCTCGACATCGCCGAGCG
TCGCCTGCCGCAGGATGGGCGCATCAAGCTCGCGATCCGAGGCGTCGACATCGACTTTCGCGTTTCGACGCTGCCAACCG
CGCATGGAGAGAGCATCGTTCTGCGCATTCTCGACCGCAGCCAGATCGCGCTGGATTTCGACAGGCTAGGCTTCGAGCCG
AAGACAACGGCGCAACTGCGCAAGGTCATGCGCAATCCCAACGGCATCGTGCTCGTCACCGGCCCGACAGGCTCCGGCAA
GACAACGACGCTTTACACCGCGCTCAAGGAGCTGACGACGCCGGATGCCAAAGTGTTCACCGTCGAGGATCCGATTGAAT
ATCAGCTTGCGGGCGTCAATCAGGTTCAGGTGCAGCCGGCGATCGGCCTCGACTTTCCAAATACGCTGCGCGCCATCTTA
CGCCAGGACCCCGACATTATCATGATCGGCGAAATTCGCGACTCGGCGACGGCGCGCATCGCCATACAAGCGTCGCTTAC
GGGCCATCTCGTCTTTTCGACATTGCATACGAACAGCGCCGCCGCTTCGATAACCCGCCTCATCGACATGGGCGTCGAGA
GTTACCTTATCGCCTCCACGGTGAAAGCGGTGCTGGCCCAGCGATTGGTGCGGCGCCTGTGCGAAGTCTGTGCGGCGCCT
CTCGAGTCGCGCGAGCAGGTCCGCGCCCAATTTGCAGGAGAAATCTTCGCCCGCGGCCCCGACCGGCTGTCATCGCCGAA
AGGCTGCCCGCAATGCCGAAATCTGGGGTATTCTGGTCGTGTGACCATTGCCGAGCTACTCATCGTGAACGAGCGCATGC
AGCGCCTTGTGTGCGAAAGCGCGCCCGACGCAGCGCTCGAGGCCGCGGCCCGCGAAGACGGGATGTCCACCATGTATCAG
TGCGGGATGGACAAGGCTTGGCGCGGCGAAACGACGATTGAAGAAGTCGCGCGCGTTACGCGCATGGATTGA

Protein sequence :
MESQTESGSSARGDRAAWPDVNSPHFATSFAAFLLAQNAIDDLALQRSLRAATQSGERFDHVLTKLGLVSEADLCSHLSK
FLKIPQLRAADMPLEPPLREEIPEKFIHANRLLPLSLDGQRLKLAVADPLDLEPVRALAYSTGYDIDLLIISPAQFEKAW
SALYGARQDGAPILDNDLRANDASEFDLQRLRDIANEAPVVRRVNQIIADAIEARASDIHIEPSLEAVQVRYRIDGALRA
AETLPPGLKAAVASRIKIMARLDIAERRLPQDGRIKLAIRGVDIDFRVSTLPTAHGESIVLRILDRSQIALDFDRLGFEP
KTTAQLRKVMRNPNGIVLVTGPTGSGKTTTLYTALKELTTPDAKVFTVEDPIEYQLAGVNQVQVQPAIGLDFPNTLRAIL
RQDPDIIMIGEIRDSATARIAIQASLTGHLVFSTLHTNSAAASITRLIDMGVESYLIASTVKAVLAQRLVRRLCEVCAAP
LESREQVRAQFAGEIFARGPDRLSSPKGCPQCRNLGYSGRVTIAELLIVNERMQRLVCESAPDAALEAAAREDGMSTMYQ
CGMDKAWRGETTIEEVARVTRMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-85 45
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-85 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BN69_1526 YP_006591628.1 general secretion pathway protein E, type II secretion system ATPase VFG2048 Protein 5e-86 45
BN69_1526 YP_006591628.1 general secretion pathway protein E, type II secretion system ATPase VFG0182 Protein 2e-86 45
BN69_1526 YP_006591628.1 general secretion pathway protein E, type II secretion system ATPase VFG1876 Protein 7e-86 44
BN69_1526 YP_006591628.1 general secretion pathway protein E, type II secretion system ATPase VFG0112 Protein 1e-84 43
BN69_1526 YP_006591628.1 general secretion pathway protein E, type II secretion system ATPase VFG1880 Protein 8e-85 41
BN69_1526 YP_006591628.1 general secretion pathway protein E, type II secretion system ATPase VFG0233 Protein 5e-78 41