Gene Information

Name : PGA2_239p2030 (PGA2_239p2030)
Accession : YP_006589788.1
Strain :
Genome accession: NC_018421
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 227550 - 228821 bp
Length : 1272 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCGGGACAGAACGGATTTGCGTTATCGGGCTTGGCTATGTCGGGCTGCCGCTGGCGGTTGAGTTTGGCAGATCCCG
TCCGGTGGTCGGGTTTGATATCAGCGCCGAGCGTATTGACGCGTTGCGGGCTGGTGAGGACAGCACCCGCGAAATCAGCG
CTGAGGCCTTGTCCAGCGCCGCGCATCTGACATTGACCGCTGACCCGGCAGAGATCGCCGACTGCACGATCTTCATTGTG
ACTGTCCCGACCCCGATCGACGACAGCCGCCGACCGGATTTGACGCCTCTGCTGCGCGCCTCCGAAACGGTTGGACGGTT
TCTGAAGCCCGGCGATCTGGTGATCTATGAATCGACGGTCTATCCCGGCGCCACCGAAGAGGATTGCGTTCCTGTGCTGG
AACGGTTGTCCGGTCTGACCTTCAACCGTGATTTCTATGCGGGCTATAGCCCTGAGCGGATCAACCCCGGCGATAAGACG
CGCCGCCTGCCGGATATCGTCAAGGTGACTTCCGGGTCGACGCCGGAGACAGCGGAGCGGGTCGACGCCCTTTACCGTGA
GATTGTGGTGGCGGGCACGCACAAGGCCGAGAGCATTCGCATCGCCGAAGCGGCCAAAGTGATTGAGAACAGCCAGCGTG
ATATCAACATCGCGCTGATCAATGAGCTGGCCAAGATCTTCAATCGCATGGATATCGATACCGAAGCGGTTCTGCGCGCT
GCGGGAACGAAGTGGAATTTTCTCAACTTTCGCCCGGGTCTGGTGGGCGGACACTGCATCGGCGTTGACCCCTATTACCT
GACCCACAAGGCAGAACAGCTGGGCTACCACCCCGAAATTCTGTTGGCAGGGCGGCGTCTGAATGACGGAATGGGATCAT
ATGTTGCCAGCCAGATGGTCAAATCCATGCTCAAACGCCGGATGGCTGTTGCTGATGCGCGGGTGCTGGTGATGGGGTTG
ACGTTCAAGGAGAACTGCCCCGATTTGCGCAACACACGGGTGATCGATGTGGTGCGCTGCCTTGAAGAATTTGGTCTGAC
AGTGGATGTACATGATCCCCACGCGGACCCTGATGAGGCACGGGCTGAATACGGCGTAGATCTTGTCGCGGACCCGGAGG
CGGGGAGCTATGATGGCATGGTCCTGGCGGTTGCCCATCAGGAGTTTCGCGACATGGGCGCCACGCAGATCCGGGCCTTG
GGTCGAGCTGATGCGCTGCTCTATGATCTGAAGTATGTGCTGACACCGGATCAGTCAGACCTGCGGCTCTGA

Protein sequence : 
MSGTERICVIGLGYVGLPLAVEFGRSRPVVGFDISAERIDALRAGEDSTREISAEALSSAAHLTLTADPAEIADCTIFIV
TVPTPIDDSRRPDLTPLLRASETVGRFLKPGDLVIYESTVYPGATEEDCVPVLERLSGLTFNRDFYAGYSPERINPGDKT
RRLPDIVKVTSGSTPETAERVDALYREIVVAGTHKAESIRIAEAAKVIENSQRDINIALINELAKIFNRMDIDTEAVLRA
AGTKWNFLNFRPGLVGGHCIGVDPYYLTHKAEQLGYHPEILLAGRRLNDGMGSYVASQMVKSMLKRRMAVADARVLVMGL
TFKENCPDLRNTRVIDVVRCLEEFGLTVDVHDPHADPDEARAEYGVDLVADPEAGSYDGMVLAVAHQEFRDMGATQIRAL
GRADALLYDLKYVLTPDQSDLRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-132 62
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-132 62
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-109 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGA2_239p2030 YP_006589788.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 6e-133 62