Gene Information

Name : A35E_00540 (A35E_00540)
Accession : YP_006589257.1
Strain : secondary endosymbiont of Heteropsylla cubana
Genome accession: NC_018420
Putative virulence/resistance : Virulence
Product : single stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 963409 - 963936 bp
Length : 528 bp
Strand : +
Note : PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)

DNA sequence : 
ATGGCTAGTAGAGGCGTAAATAAAGTGATTTTAATTGGAAACTTAGGCCACGATCCAGAAATTCGCTATATGCCTAATGG
TGGGGCGGTAGCGAACATTACGCTGGCTACGTCAGAAACTTGGCGTGATAAGCAGACTGGTGAATCGAGAGAAAAAACAG
AATGGCATCGAATAGTTTTTTTTGGAAAACTAGCTGAAATAGCCGGTGAATACCTGAGAAAAGGCTCTCAAGTATATATT
GAGGGTTCACTTCAAACACGAAAATGGCAAGATCAAAGTGGCCAAGATCGCTATACAACTGAAGTTGTAGTTAATATGAA
TGGTACGATGCATATGCTGGGTAATCGTCAGAGTTCTACTCTCACTAGTAGCGGTAAAGAAAATGGATGGAATCACAATC
AGCAACTACAAGGAAATAACTCACAACTTTCTGACGGTAATGTAACATCAGGACGACATGTAGCACAAAACAGTTCAATA
TTAAACAATGAAACAACAATAGATTTTGATGACGATATTCCATTCTAA

Protein sequence : 
MASRGVNKVILIGNLGHDPEIRYMPNGGAVANITLATSETWRDKQTGESREKTEWHRIVFFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNMNGTMHMLGNRQSSTLTSSGKENGWNHNQQLQGNNSQLSDGNVTSGRHVAQNSSI
LNNETTIDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 5e-45 59
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 5e-45 59
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 4e-45 59
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 1e-35 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A35E_00540 YP_006589257.1 single stranded DNA-binding protein VFG0576 Protein 4e-44 61