Gene Information

Name : A35E_00315 (A35E_00315)
Accession : YP_006589048.1
Strain : secondary endosymbiont of Heteropsylla cubana
Genome accession: NC_018420
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase (class II)
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 575033 - 576553 bp
Length : 1521 bp
Strand : -
Note : PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial

DNA sequence :
ATGTGTAAATTACCCTCATATAACAACGCACTTCATACGGTACATATAAAACACGAATTAAATTCACGAAAAGAAAAGCT
TAAACAATGGCGTCAAGAAGGTATTACTTTTCCAAACAAATTTCGACAAAATATAAATTTTGACCAACTCCACACTTACT
ATGATGAAAAAACTAATGAAGAATTGATGACCTTAAATATTGAAGTAAGTATTGCAGGTCGTATGACTAGTCGACGTATT
ATGGGAAAAGCTTCTTTCGCTACCCTACAAAACTTTAGTGGTAAAATTCAGATTTATGTTGTTTGCAATAAACTGTTAGA
AGGAGAATATAACGAGAAGTTTAAAAAATGGGATCTAGGCGATATTATTGGGGTCTACGGAACATTATTTAAGACCAAAA
AAGGTGAACTATCCGTTTATTGCAGTAAAATTTACCTTATAAGTAAAGCGATGCGTCCCATCCCGAGCAAGTTTTACGGA
CTTACTGATCAGGAACTCCGCTATCGCCAACGCTACCTAGATTTAATCGTAAACAATAAAACCAGACAAACATTTAAAAT
TCGTTTTAACCTTATCTCTGAAATTCGTCGATTTATGATGGATCATGATTTTATCGAAGTAGAAACACCCATGATGCAAA
GCATTCCAGGCGGTGCTACAGCACGCCCATTTATTACCCATCATAATGCTCTACATGTTGATATGTACCTACGTATTTCA
CCAGAACTATACTTAAAACGCCTAATGGTAGGCGGCTTCGAACGAATTTTTGAAATTAACAGAAATTTTCGCAATGAAGG
TTTATCTTCTTACCATAATCCCGAATTTACTATGCTAGAACTATATATGGCCTATGCGGACTACATCGACTTAATGGTAT
TAGTGGAAAATTTAATGCGCAAACTCACACAACAAGTACTTGGTACTAACATAGTGCAATATGGAGATCAAACTTTTGAT
TTCAGCAAATCATTTATCACAATGACCATGACCGAAGCTATCTATCATCATCATCCTCACATTAAATCTGAAACGCTTAA
TGATATCACTGCTGCAACCGCTATTGCTAAATCACTTGGTGTTCTTGTTGACAGTCGATGGGGGTTAGGACGAGTGCTAA
CTGAAATTTTTGAAGAAACCACTGAATCTCACCTTATTCAGCCAACTTTTATAACCCACTATCCAGTAGAAGTTTCGCCA
TTAGCACGACGCAATGACACCGATCCATTGTATACCGATCGATTTGAATTATTTATAGGAGGTCGAGAAATTGGAAATGG
CTTTTCAGAGCTTAATGATCCAGAAGATCAAGCAAGTCGGTTTATTCAACAAGCTCAAAATAAAAATGTTGCAAAACATG
AAACAATGTTTTATGATGAAGATTATGTTACTGCCTTAGAAAATGGTATGCCACCTACTGCTGGGTTAGGTATAGGTATT
GATCGTTTAGTTATGCTATTAACCAACAATAAAACTATCCGTGACGTAATTTTATTTCCGATGTTGCGTCCTCATAAATA
A

Protein sequence :
MCKLPSYNNALHTVHIKHELNSRKEKLKQWRQEGITFPNKFRQNINFDQLHTYYDEKTNEELMTLNIEVSIAGRMTSRRI
MGKASFATLQNFSGKIQIYVVCNKLLEGEYNEKFKKWDLGDIIGVYGTLFKTKKGELSVYCSKIYLISKAMRPIPSKFYG
LTDQELRYRQRYLDLIVNNKTRQTFKIRFNLISEIRRFMMDHDFIEVETPMMQSIPGGATARPFITHHNALHVDMYLRIS
PELYLKRLMVGGFERIFEINRNFRNEGLSSYHNPEFTMLELYMAYADYIDLMVLVENLMRKLTQQVLGTNIVQYGDQTFD
FSKSFITMTMTEAIYHHHPHIKSETLNDITAATAIAKSLGVLVDSRWGLGRVLTEIFEETTESHLIQPTFITHYPVEVSP
LARRNDTDPLYTDRFELFIGGREIGNGFSELNDPEDQASRFIQQAQNKNVAKHETMFYDEDYVTALENGMPPTAGLGIGI
DRLVMLLTNNKTIRDVILFPMLRPHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 3e-147 61
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 1e-84 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A35E_00315 YP_006589048.1 lysyl-tRNA synthetase (class II) VFG1668 Protein 2e-147 61