Gene Information

Name : ECENHK_04380 (ECENHK_04380)
Accession : YP_006577387.1
Strain : Enterobacter cloacae ENHKU01
Genome accession: NC_018405
Putative virulence/resistance : Virulence
Product : lysine decarboxylase LdcC
Function : -
COG functional category : -
COG ID : -
EC number : 4.1.1.18
Position : 954694 - 956826 bp
Length : 2133 bp
Strand : +
Note : COG1982 Arginine/lysine/ornithine decarboxylases

DNA sequence :
GTGAACATCATTGCCATTATGGGGCCGCACGGCGTCTTTTATAAAGACGAGCCCATCAAGGAGCTGGAGCAAGCCCTTCA
GTCGCGCGGGTATCAGCTCATCTGGCCGCACAACAGCGCCGACCTGCTGAAGTTTATTGAGCATAACCCGCGAATCTGTG
GCGTGATCTTCGACTGGGACGAATACGATCTGGAGCTGTGCAGCGAGATCAACAAGCTGAACGAATATCTCCCGCTGTAT
GCGTTTATCAATACCCACTCGACCATGGACGTCAGCGCGCATGATATGCGGATGGCGCTGTGGTTCTTTGAATATTCTCT
CGGCGTGGCGGAAGATATCGCGACCCGCATTCAGCAGTACACGGGTGAATACCTCGATAACATTACGCCGCCCTTTACCC
GCGCGCTTTTTACCTATGTGAAAGAGGGGAAATACACCTTCTGCACGCCAGGGCATATGGCCGGAACAGCCTATCAAAAA
AGCCCGGTAGGCTGTCTGTTCTATGATTTTTTCGGGGGCAACACGCTGAAAGCGGACGTGTCAATTTCGGTCACGGAACT
GGGCTCTCTGCTGGATCATACCGGCCCGCATCTGGAGGCCGAGGAGTATATTGCCCGCACCTTTGGCGCTGAGCAGAGCT
ATATGGTGACCAACGGCACCTCGACCTCGAACAAAATCGTCGGGATGTACGCTGCGCCTGCGGGCAGCACGCTGCTGATT
GACCGCAACTGCCATAAATCGCTGGCGCACCTGCTGATGATGAGCGACGTGGTGCCGCTCTGGTTATCCCCTACGCGTAA
CGCGCTGGGGATTCTCGGCGGCATTCCACGCCGGGAGTTCACGCATCAAACCATTGAAAAGAAAGTAGCGGCGATCCCTG
GCGCAAGCTGGCCTGTTCATGCGGTGATCACCAATTCCACCTATGACGGCCTGTTATACAACACCAACTGGATCAAGCAG
ACGCTGGACGTGCCGTCGATCCACTTCGATTCTGCGTGGGTGCCTTATACCAATTTTCACCCGATTTATTCGGGTAAGAG
CGGGATGAGCGGCGAGCGCGTGCCGGGCAAAGTGTTCTTCGAAACGCAGTCGACCCACAAAATGCTGGCCGCCTTCTCCC
AGGCGTCTCTTATTCACATCAAAGGCGAGTACGACGAGGAGACCTTCAACGAAGCCTTTATGATGCATACCACCACTTCA
CCGAGCTATCCGCTGGTGGCATCTATCGAAACCGCGGCGGCGATGCTGCGCGGCAACCCGGGTAAACGCCTGATAAACCG
CTCGGTGGAGCGGGCGCTGCATTTCCGTAAAGAGGTCCAGCGGCTGAAAGATGAGGCAGACGGCTGGTTCTTTGATATCT
GGCAGCCGGAAGAGATCGACGAGGCCGAGTGCTGGCCCGTTGCGCCTGGGGAGAGCTGGCACGGCTTCCGCGATGCCGAT
GCGGACCACATGTTCCTCGATCCGGTTAAGGTGACGATCCTGACGCCTGGCATGGACGAGCAGGGTGTAATGGGTGATGA
AGGTATTCCCGCCGCGCTGGTGGCGAAGTTCCTTGATGAGCGCGGCGTGGTAGTGGAGAAGACCGGCCCCTATAATTTGT
TGTTCCTGTTCAGTATCGGGATCGATAAAACCCGGGCAATGGGTCTGCTGCGCGGGCTGATGGAGTTTAAGCGTGCCTAC
GATCTCAACCTGCGGGTGAAGAATATGCTGCCGGATCTCTACGCGGAAGATCCTGACTTCTACCGCAATATGCGCATTCA
GGATCTGGCCCAGGGGATCCACAGATTGATCCGCCAGCACGATCTGCCGCGCCTCATGCTTCAGGCGTTTGACGTCCTGC
CGGTCATGAAGCTGACGCCTCACAAGGCCTGGCAGCGGCAGGTAAAAGGTGAGGTAGAAACCGTTGAGCTGGAAAATCTG
GTCGGGCGCGTGTCGGCCAATATGATCCTGCCTTACCCACCGGGTGTACCGCTGCTGATGCCGGGGGAAATGATCACCGA
GGAGAGCCGGGCAGTGCTCGATTTTCTGCTGATGCTCTGTTCGGTGGGGCGTCACTATCCGGGTTTCGAGACGGATATTC
ACGGTGCGAAGCGCGATGAGCACGGCGTTTACTGGGTGCGAGTCCTAAAATAA

Protein sequence :
MNIIAIMGPHGVFYKDEPIKELEQALQSRGYQLIWPHNSADLLKFIEHNPRICGVIFDWDEYDLELCSEINKLNEYLPLY
AFINTHSTMDVSAHDMRMALWFFEYSLGVAEDIATRIQQYTGEYLDNITPPFTRALFTYVKEGKYTFCTPGHMAGTAYQK
SPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLSPTRNALGILGGIPRREFTHQTIEKKVAAIPGASWPVHAVITNSTYDGLLYNTNWIKQ
TLDVPSIHFDSAWVPYTNFHPIYSGKSGMSGERVPGKVFFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTTTS
PSYPLVASIETAAAMLRGNPGKRLINRSVERALHFRKEVQRLKDEADGWFFDIWQPEEIDEAECWPVAPGESWHGFRDAD
ADHMFLDPVKVTILTPGMDEQGVMGDEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLMEFKRAY
DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHRLIRQHDLPRLMLQAFDVLPVMKLTPHKAWQRQVKGEVETVELENL
VGRVSANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSVGRHYPGFETDIHGAKRDEHGVYWVRVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 70
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECENHK_04380 YP_006577387.1 lysine decarboxylase LdcC VFG1670 Protein 0.0 61