Gene Information

Name : ECENHK_20330 (ECENHK_20330)
Accession : YP_006580521.1
Strain : Enterobacter cloacae ENHKU01
Genome accession: NC_018405
Putative virulence/resistance : Virulence
Product : general secretion pathway protein D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4327270 - 4329255 bp
Length : 1986 bp
Strand : +
Note : COG1450 Type II secretory pathway, component PulD

DNA sequence :
ATGGATGGAACCTCCGCAAGCCAGCGACTGAAAGCGCTTTCGCTGTTTTTTTTGCTCATCGCCACCGCTAAGCCCGGATA
TTCAGCTGATTACACGGCGAATTTTAACGGTGCGGACATTCAAACGTTTGTCAACATCGTGGGACAAAACATGGGGAAAA
CGATTCTGATTGATCCCGATGTTAAAGCATCCATTTCCGTCAGAAGCGTAGATACCTTTAATAAAGAGGAATACTATCAA
TTTTTCCTGAGCGTACTCGACCTTTATGGCTTTTCACTTATCACTCTTGATAATGGCCTGCTGAAAGTCGTGCGTTCAGA
AACCGTGAAAAATCTTCCAGGAAAGCTTACCAGTAACACGCAGCCCGGCAAGGGTGATGAACTGGTGACACGTATTGTTT
CTCTGGAAAATGTTCCAGCACGATCGCTGTCTCCTCTGCTTCGTCAAATGCTCGATGGCGGTAATGTCGGTAACGTCTCG
CATTATGAGCCCTCTAATGCGCTGGTCATTACCGGCAAAGCATCAACCGTCAATCGCATGCTGGAAGTCATTAAACGTGT
CGATGTCATGGGTGACGAGCAAGAGCAAATTATCCCGCTGAAATATGCTTCCGCTGTCGATCTTGCCGATGTCCTTAACA
CGCTGTCGCGTGAGAACGCAAAAGAGGCACAACCTGCGACACTCCAGACGCACATCGTTGCCGATAAAAGAAGCAATGCG
CTGATTATCAGAGGCTCAGAACGCGCCCGCGCAAGAATTACTGAGTTGGTAAAACGTCTTGATACCCAGGAGCAAGGGCA
AGGAAACACGCGGGTATGGTACCTGAAATATGCCAAAGCGGATAAGCTTGTTGACGTTTTAACCGGTGTCACGCAAAAAC
TGAAAGATGGCAAAAGTGGCACAACCAATACGGCAACCAGCAGCAGCCGCGATATCTCTATTACTGCAGATGAACAAACC
AACTCACTGGTTGTGACCGCCGATCAGGGTATTCTTCAGCAACTCGATGAGGTTATCGCTAAGCTGGATATTCGTCGTGC
ACAGGTTCTGGTGGAAGCGATTATCGTTGAAGTTCAGGACGGTAAAGGTCTGAACCTGGGTGTGCAGTGGGCTGAGAAAA
ACGTTGGTGGACAACAGTTTACCAAAACTGGCCTGCCAATCTTTAACGCGGCACAGGGCGTGGGTGAATTCAAAGCAAAC
GGAGGAATCACCAGCGATAACCCAGCTTACAACCTCTTCAGTAATTATAACGGCCTTGCGGCAGGTTTTTTCAACGGCGA
CTGGGGGGTGCTCCTCACAGCACTCAATACCGACAACAAAAACGACATCCTGTCTACGCCCAGCATCGTTACGCTTGATA
ATAAAGAAGCAGCCTTCAACGTCGGGCAGGATGTGCCCGTACTTTCCGGTTCCCAGACGACCTCCGGCGATAATATTTAC
AATACCGTCGAGCGTAAGACGGTGGGGACCAAGTTAAAAGTCACCCCGCAGATTAACGAGGGTGATTCTGTTCTGATGGA
GATCGAGCAAGAGGTTTCCAGCGTCGACACATCGACAAGCTCTTCCTCGCTCGGCCCAACCTTCAACACCCGAACAATAC
AGAATGCCGTCCTGGTGAAAAGTGGCGAAACCGTTGTGCTTGGCGGTTTGATGGATGACGCCAGTAAGCAAGAAGTTTCA
AAAGTTCCCCTGCTGGGCGATATCCCTTTGGTGGGACAGCTTTTCCGCTACACATCCAATGAGAAAAACAAACGTAACCT
GATGGTCTTTATCCGCCCGACCATTATCAGAGACGATGAGGTCTATCGTTCACTCTCACGTGAGAAATACACCAATTTCA
AAGATCTGCAAAAAGAGAGACGTGAAAAGCAAAGTGAAACACTGATTAACGTCGATAACATCAAAGAGCTTGAAGATCGG
GCTTTTAATAATGCAACGGCGACACCGGACGCTAAAAATCCGTTCAGGGAAGGTCGAACGGAATGA

Protein sequence :
MDGTSASQRLKALSLFFLLIATAKPGYSADYTANFNGADIQTFVNIVGQNMGKTILIDPDVKASISVRSVDTFNKEEYYQ
FFLSVLDLYGFSLITLDNGLLKVVRSETVKNLPGKLTSNTQPGKGDELVTRIVSLENVPARSLSPLLRQMLDGGNVGNVS
HYEPSNALVITGKASTVNRMLEVIKRVDVMGDEQEQIIPLKYASAVDLADVLNTLSRENAKEAQPATLQTHIVADKRSNA
LIIRGSERARARITELVKRLDTQEQGQGNTRVWYLKYAKADKLVDVLTGVTQKLKDGKSGTTNTATSSSRDISITADEQT
NSLVVTADQGILQQLDEVIAKLDIRRAQVLVEAIIVEVQDGKGLNLGVQWAEKNVGGQQFTKTGLPIFNAAQGVGEFKAN
GGITSDNPAYNLFSNYNGLAAGFFNGDWGVLLTALNTDNKNDILSTPSIVTLDNKEAAFNVGQDVPVLSGSQTTSGDNIY
NTVERKTVGTKLKVTPQINEGDSVLMEIEQEVSSVDTSTSSSSLGPTFNTRTIQNAVLVKSGETVVLGGLMDDASKQEVS
KVPLLGDIPLVGQLFRYTSNEKNKRNLMVFIRPTIIRDDEVYRSLSREKYTNFKDLQKERREKQSETLINVDNIKELEDR
AFNNATATPDAKNPFREGRTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspD CAE85234.1 GspD, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-123 46
gspD YP_854407.1 type II secretion protein GspD Not tested PAI I APEC-O1 Protein 2e-129 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECENHK_20330 YP_006580521.1 general secretion pathway protein D VFG2047 Protein 5e-122 46