Gene Information

Name : lysS (ECENHK_18245)
Accession : YP_006580104.1
Strain : Enterobacter cloacae ENHKU01
Genome accession: NC_018405
Putative virulence/resistance : Virulence
Product : lysyl-tRNA ligase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 3899532 - 3901049 bp
Length : 1518 bp
Strand : -
Note : COG1190 Lysyl-tRNA synthetase (class II)

DNA sequence :
ATGTCTGAACAACAAGCACAGGGCGCTGACGCGGTAGTCGATCTTAACAACGAACTGAAAACCCGCCGCGAGAAGCTGGC
AGCGCTGCGTGAGCAGGGCGTGCCGTTCCCGAACGATTTTCGTCGTGACCACACCTCAGACCAACTGCACGCTGACTTCG
ACGGTAAAGAGAACGAAGAGCTGGAAGCGCTGAACATCGAAGTGGCCGTTGCTGGCCGTATGATGACCCGTCGTATTATG
GGTAAAGCCTCCTTCGTGACTTTGCAGGACGTGGGTGGCCGTATTCAGCTGTATGTTTCCCGTGACGATCTGCCGGAAGG
CATCTACAACGAGCAGTTCAAGAAGTGGGATCTGGGCGATATCCTTGGCGCGAAAGGTAAACTGTTCAAAACCAAAACCG
GTGAACTGTCTATCCACTGTACCGAGCTGCGTCTGCTGACCAAAGCGCTGCGTCCGCTGCCGGACAAATTCCACGGCCTG
CAGGATCAGGAAGCGCGCTATCGTCAGCGTTATCTGGATCTCATCTCTAACGATGAATCCCGCAAGACCTTTAAAATTCG
CTCCCAGATCATGGCCGGTATTCGCCAGTTCATGGTGAACCGCGACTTTATGGAAGTGGAAACCCCGATGATGCAGGTGA
TTCCAGGCGGTGCGTCTGCCCGTCCATTCATCACCCATCATAACGCCCTGGACCTGGACATGTACCTGCGTATCGCGCCG
GAACTGTACCTGAAGCGTCTGGTGGTAGGTGGCTTTGATCGCGTATTCGAGATCAACCGTAACTTCCGTAACGAAGGTAT
CTCCGTTCGTCATAACCCAGAGTTCACCATGATGGAACTCTATATGGCGTATGCAGATTACAAAGATCTGATCGAGCTGA
CCGAATCCCTGTTCCGTACCCTGGCGCAGGACATTCTGGGCACCACCCAGGTCCCTTACGGTGAAGAAGTGTTCGACTTC
GGCAAGCCGTTCGAAAAACTGACCATGCGCGAAGCGATCAAGAAGTACCGTCCTGAAACCAACATGGCGGATCTGGATAA
CTTCGACTCTGCGAAAGCGATCGCGGAAAGCATCGGTATCAAGGTTGAGAAGAGCTGGGGTCTGGGCCGTATCGTGACCG
AGATCTTCGAAGAAGTGGCCGAAGCGCACCTGATTCAGCCGACCTTCATCACCGAATACCCTGCTGAAGTGTCTCCGCTG
GCGCGTCGTAATGACGAGAACCCGGAAATCACTGACCGTTTCGAATTCTTCATCGGCGGCCGTGAAATCGGCAACGGCTT
TAGCGAGCTGAACGATGCGGAAGATCAGGCGCAGCGCTTCCAGGATCAGGTTGATGCGAAAGCAGCGGGCGATGACGAAG
CGATGTTCTTCGACGAAGACTACGTGACCGCGCTGGAGCACGGCCTGCCACCAACGGCGGGTCTGGGTATTGGTATCGAC
CGTATGGTCATGCTGTTCACCAACAGCCACACCATCCGTGACGTGATCCTGTTCCCGGCGATGCGTCCGGTGAAATAA

Protein sequence :
MSEQQAQGADAVVDLNNELKTRREKLAALREQGVPFPNDFRRDHTSDQLHADFDGKENEELEALNIEVAVAGRMMTRRIM
GKASFVTLQDVGGRIQLYVSRDDLPEGIYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
QDQEARYRQRYLDLISNDESRKTFKIRSQIMAGIRQFMVNRDFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFDRVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGTTQVPYGEEVFDF
GKPFEKLTMREAIKKYRPETNMADLDNFDSAKAIAESIGIKVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPL
ARRNDENPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFQDQVDAKAAGDDEAMFFDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-171 70
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 1e-93 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_006580104.1 lysyl-tRNA ligase VFG1668 Protein 8e-172 70