Gene Information

Name : ECENHK_05705 (ECENHK_05705)
Accession : YP_006577652.1
Strain : Enterobacter cloacae ENHKU01
Genome accession: NC_018405
Putative virulence/resistance : Resistance
Product : transcriptional activator ramA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1243930 - 1244271 bp
Length : 342 bp
Strand : +
Note : COG2207 AraC-type DNA-binding domain-containing proteins

DNA sequence : 
ATGACCATTTCCGCTCAAGTCATTGATACGATCGTCGAATGGATCGACGACAACCTGCACCAGCCGTTACGCATTGAAGA
CATTGCCCGCCATGCGGGTTACTCCAAATGGCATTTGCAGCGGCTGTTTATGCAGTATAAAGGTGAAAGCCTGGGGCGCT
ATATTCGCGAACGCAAGCTGCTGCTGGCGGCGCGGGATCTGCGTGAATCGGACGAGCGCGTTTATGAGATCTGCCTGCGC
TACGGGTTTGAATCGCAGCAGACGTTCACGCGCATCTTTACCCGCACCTTCCATCAGCCGCCAGGGGCGTACCGCAAGGA
AAACCATAGTCGGACGCACTGA

Protein sequence : 
MTISAQVIDTIVEWIDDNLHQPLRIEDIARHAGYSKWHLQRLFMQYKGESLGRYIRERKLLLAARDLRESDERVYEICLR
YGFESQQTFTRIFTRTFHQPPGAYRKENHSRTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-19 48
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 4e-16 45
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 4e-16 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP001138.1.gene612.p Protein 9e-41 87
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP001918.1.gene2033. Protein 1e-18 51
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP000647.1.gene1624. Protein 3e-18 51
ECENHK_05705 YP_006577652.1 transcriptional activator ramA BAC0560 Protein 8e-19 50
ECENHK_05705 YP_006577652.1 transcriptional activator ramA NC_002695.1.917339.p Protein 8e-19 50
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP000034.1.gene1596. Protein 7e-19 50
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP001138.1.gene1637. Protein 1e-18 50
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP001918.1.gene327.p Protein 6e-20 48
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP000647.1.gene4499. Protein 1e-19 48
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP001138.1.gene4488. Protein 7e-20 48
ECENHK_05705 YP_006577652.1 transcriptional activator ramA NC_002695.1.914293.p Protein 6e-19 45
ECENHK_05705 YP_006577652.1 transcriptional activator ramA BAC0371 Protein 6e-19 45
ECENHK_05705 YP_006577652.1 transcriptional activator ramA NC_010558.1.6276025. Protein 2e-16 45
ECENHK_05705 YP_006577652.1 transcriptional activator ramA CP000034.1.gene4505. Protein 1e-18 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECENHK_05705 YP_006577652.1 transcriptional activator ramA VFG0585 Protein 6e-20 48
ECENHK_05705 YP_006577652.1 transcriptional activator ramA VFG1038 Protein 1e-16 45