Gene Information

Name : ECENHK_05545 (ECENHK_05545)
Accession : YP_006577620.1
Strain : Enterobacter cloacae ENHKU01
Genome accession: NC_018405
Putative virulence/resistance : Virulence
Product : outer membrane usher protein FimD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1206562 - 1209123 bp
Length : 2562 bp
Strand : +
Note : COG3188 P pilus assembly protein, porin PapC

DNA sequence :
ATGAAAAACCATCAGGGACGTTACTGCCCGGTTGCGCTGGCGCTGATGGCCGCGCTCTGGCCCCAGGCTGGCTGGAGCGA
AAGCTACTTCAACCCGGCCTTCTTGTCTGACGATACTGCCAGCGTGGCGGATTTGTCGCGTTTTGAACAAGGACACCAGC
AGGCACCCGGCGTTTATCGCGTGGATATCTGGCGTAACGATGAGTTTATCGGCACTCAGGACGTGCGTTTTGAGCAGGCT
GAGAACACGCCACCGGTGGCGGGCGGTCTGACCCCGTGCATTACGCGCGCGATGCTCGATCGCTTTGGCGTCAACGTTGC
GGCGTTTCCCGAACTGGCTAACGTGCAGGGCGAAACCTGCGTTCCGTTGACCACGGCCATTCCCGGCAGCGAAACGGTAT
TTAACTTTGCCTCACAGCGTCTGAACGTCAGCCTGCCGCAGGTGGCGATGCAAAACAGTGCGCGCGGCTACATCCCGCCC
GAACAGTGGGATGAAGGTATTCCCGCCGCCCTGGTGAACTACAGCTTCACGGGCAACCGGGGAAGCGAAGACGACAGCTA
CTATCTCAACCTGCAGAGCGGGCTGAACTATGGTGCCTGGCGTTTACGTAACAACGGCGCATGGCGTTACACCCAGAATA
ACGGGCAGCGGCACAGTGAGTGGGAGAATATTGGCACCTGGGCGCAGCGCACCGTTATCCCGCTCAAAAGCGAACTGGTG
CTGGGCGACAGCAATACCGGGAATGATGTTTTCGACAGCGTCGGTTTTCGCGGCGGACGACTTTACTCGTCCGACAGCAT
GTACCCGGACAGCCTGCAGGGCTACGCCCCGACCGTGCGCGGTATTGCCAGGACGCCAGCCAAAGTTGTGGTGCGTCAAA
ACGGCTACGTTATCTATCAAAGCTACGTTCAGCCTGGTGCCTTTGCCATCACCGATCTTAACCCGACCTCCTCAAGCGGT
GACCTGGAGGTGACGGTGGAAGAGAAAGACGGCAGCCAGCAGCGCTACACCGTGCCGTATTCCACCGTCCCGCTGCTGCA
GCGAGAAGGGCGCTGGAAATACGATCTCGTGGCGGGGGACTATCGCAGCGGTAACAGCGACCAGGATACGCCGTTCTTCA
CCCAGGGCACCCTGGTGACCGGTCTTGCCAACGGCTTTACCCTGTATGGCGGTACGCAGCTGGCGTCACGCTATACCGCG
CTGGCCGTCGGGGCCGGGAAAAACCTCGGTGACTGGGGCGCGGTATCGGTCGATATCACTCATGCCCGCAGCCAGCTCGC
GGACGACAGCAAGCACGAAGGGCAGTCGCTGCGTTTTCTTTATGCCAAATCGCTCAACGGCTTCGGCACCAACTTCCAGC
TGCTGGGCTACCGCTACTCCACCAAAGGGTTTTACACCCTGGATGATGTCGCCTGGCGCTCAATGGAAGGCTATCAGTAT
GCCGATAATCAGGACGGTAACGATGTGCCTGACGTACAGAGTTATCACAACCTGACGTGGAACAAAAAAGGCCGCTTTCA
GCTCAACGTCTCTCAGTCACTGGGGGATTACGGCTCGGTCTATATTTCCGGGAGTGAGCAAACCTACTGGGGGACGGACG
AAACGAACCTCTGGTATCAGCTGGGTTACGCGGGGGGCGTGAAGGGGATCAACTATTCCGTCTCGTGGTCGTGGAACAAA
TCCGTCGGTATCGACGGGACTGACCGGATCGCGTCGTTCAACGTCTCCGTGCCGTTTAGCTTGTTTACCCGTCAGGGCTA
TCGCCGGGACAGCGCGATTGACCGCGCCTACGCCACGGCATCCGCCAGCCGAAACAGTGAGGGTGATACCAGCTGGCAAA
CCGGCGTCAGCGGCACGCTGCTGGAGGACCGCAACCTGAACTACAGCGTGACCCAGGGACACGCCAGCACCAACGGCTCA
AGCGGAAGCGCCAGCGCCAACTGGCAGGCAACCTACGGCACGCTGGGGGTGGGCTACAACTATTCCCGCGATCAGCACGA
TTTCAACTGGCAGCTCTCCGGCGGGGTGGTCGGCCATGCTGATGGCGTGACCTTTAGCCAGCCGCTGGGCGACACCAACG
TGCTGATCAAAGCCCCGGGGGCATCAGGCGTCAGCGTGGAAAACCAGACCGGCGTGAAGACCGACTGGCGCGGCTATGCG
GTGATGCCGTATGCCACCGTCTATCGCTATAACCGCGTGGCGCTGGATACCAATACCATGAGCAACAACACCGATATCGA
AAATAACGTGAGCAGCGTGGTGCCGACCAAAGGCGCACTGGTGCGCGCCAGCTTTGACACCCGTATTGGCGTGCGTGCCC
TGCTGACCGTCACACGTGGTAACCAGCCCGTGCCGTTCGGCGCCGTGGTGCGTGAAACCCAGAGTGGCGTGACCAGCATG
GTGGGGGATGACGGGCAAATTTACCTGAGTGGGCTGCCGCTCGAAGGCGAACTGCTGATCCAGTGGGGGAACGGGGCACA
GTCCCAGTGCCGTGCGCCTTACAGCTTGCCTGAAAAGAGCCTGCAACAGGCAATCACACTTAAGGGGATCCGCTGTGATT
AA

Protein sequence :
MKNHQGRYCPVALALMAALWPQAGWSESYFNPAFLSDDTASVADLSRFEQGHQQAPGVYRVDIWRNDEFIGTQDVRFEQA
ENTPPVAGGLTPCITRAMLDRFGVNVAAFPELANVQGETCVPLTTAIPGSETVFNFASQRLNVSLPQVAMQNSARGYIPP
EQWDEGIPAALVNYSFTGNRGSEDDSYYLNLQSGLNYGAWRLRNNGAWRYTQNNGQRHSEWENIGTWAQRTVIPLKSELV
LGDSNTGNDVFDSVGFRGGRLYSSDSMYPDSLQGYAPTVRGIARTPAKVVVRQNGYVIYQSYVQPGAFAITDLNPTSSSG
DLEVTVEEKDGSQQRYTVPYSTVPLLQREGRWKYDLVAGDYRSGNSDQDTPFFTQGTLVTGLANGFTLYGGTQLASRYTA
LAVGAGKNLGDWGAVSVDITHARSQLADDSKHEGQSLRFLYAKSLNGFGTNFQLLGYRYSTKGFYTLDDVAWRSMEGYQY
ADNQDGNDVPDVQSYHNLTWNKKGRFQLNVSQSLGDYGSVYISGSEQTYWGTDETNLWYQLGYAGGVKGINYSVSWSWNK
SVGIDGTDRIASFNVSVPFSLFTRQGYRRDSAIDRAYATASASRNSEGDTSWQTGVSGTLLEDRNLNYSVTQGHASTNGS
SGSASANWQATYGTLGVGYNYSRDQHDFNWQLSGGVVGHADGVTFSQPLGDTNVLIKAPGASGVSVENQTGVKTDWRGYA
VMPYATVYRYNRVALDTNTMSNNTDIENNVSSVVPTKGALVRASFDTRIGVRALLTVTRGNQPVPFGAVVRETQSGVTSM
VGDDGQIYLSGLPLEGELLIQWGNGAQSQCRAPYSLPEKSLQQAITLKGIRCD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2D AFH78429.1 putative fimbrial usher protein Virulence KpGI-5 Protein 0.0 51
sfaF CAC16953.2 SfaF protein Virulence PAI III 536 Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECENHK_05545 YP_006577620.1 outer membrane usher protein FimD VFG0446 Protein 0.0 75
ECENHK_05545 YP_006577620.1 outer membrane usher protein FimD VFG0876 Protein 0.0 49
ECENHK_05545 YP_006577620.1 outer membrane usher protein FimD VFG1645 Protein 0.0 48
ECENHK_05545 YP_006577620.1 outer membrane usher protein FimD VFG0912 Protein 0.0 48
ECENHK_05545 YP_006577620.1 outer membrane usher protein FimD VFG0454 Protein 7e-162 43