Gene Information

Name : PGA1_262p02300 (PGA1_262p02300)
Accession : YP_006575230.1
Strain :
Genome accession: NC_018291
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 251609 - 252880 bp
Length : 1272 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGGGACAGAACGGATTTGCGTTATCGGGCTTGGCTATGTCGGGCTGCCGCTGGCGGTTGAGTTTGGCAGATCCCG
TCCGGTGGTCGGGTTTGATATCAGCGCCGAGCGTATTGATGCGTTGCAGGCTGGTGAGGACAGCACCCGCGAAATCAGTG
CTGAGGCCTTGTCCAGCGCCGCGCATCTGACATTGACCGCTGACCCGGCAGAGATCGCCGACTGCACGATCTTCATTGTG
ACTGTCCCGACCCCGATCGACGACAGCCGCCGACCGGATTTGACGCCTCTGCTGCGCGCCTCCGAAACGGTTGGACGGGT
TCTGAAGCCCGGCGATCTGGTGATCTATGAATCGACGGTCTATCCCGGCGCCACCGAAGAGGATTGCATTCCTGTGCTGG
AACGGTTGTCCGGTCTGACCTTCAACCGTGATTTCTATGCGGGCTATAGCCCTGAGCGGATCAACCCCGGCGATAAGACG
CGCCGCCTGCCGGATATCGTCAAGGTGACCTCCGGGTCTACGCCGAAGACAGCGGAGCGGGTCGACGCCCTTTACCGTGA
GATTGTGGTGGCGGGCACGCACAAGGCCGAGAGCATTCGCGTCGCCGAAGCGGCCAAGGTGATTGAGAACAGTCAGCGCG
ATATCAACATCGCGCTGATCAATGAGCTGGCCAAGATCTTCAACCGTATGGATATCGATACCGAAGCGGTTCTGCGCGCT
GCGGGGACGAAGTGGAATTTTCTCAACTTTCGCCCGGGTCTGGTGGGTGGACACTGCATCGGCGTTGATCCCTATTACCT
GACGCACAAGGCAGAACAGCTGGGCTACCACCCCGAAATCCTGTTGGCAGGGCGGCGTTTGAATGACGGAATGGGATCAT
ATGTTGCCAGCCAGATGGTCAAATCCATGCTCAAACGCCGGATGGCGGTTGCTGATGCGCGGGTGCTGGTGATGGGGTTG
ACGTTCAAGGAGAACTGCCCCGATTTGCGCAATACACGGGTGATCGACGTCGTGCGTTGCCTTGAGGAATTTGGCCTGAC
AGTGGATGTCCATGATCCCCACGCGGACCCTGATGAGGCACGGGCTGAATACGGCGTGGATCTCGTCGCGGAGCCGCAGG
CGGGCAGTTATGATGGCATGGTCCTGGCGGTGGCCCATCAGGAGTTTCGCGATATGGGTGCTGCGCAGATCCGGGCCTTG
GGCCGGGCTGATGCGCTGCTCTATGATCTGAAGTATGTGCTGACACCGGATCAGTCAGACCTGCGGCTCTGA

Protein sequence :
MSGTERICVIGLGYVGLPLAVEFGRSRPVVGFDISAERIDALQAGEDSTREISAEALSSAAHLTLTADPAEIADCTIFIV
TVPTPIDDSRRPDLTPLLRASETVGRVLKPGDLVIYESTVYPGATEEDCIPVLERLSGLTFNRDFYAGYSPERINPGDKT
RRLPDIVKVTSGSTPKTAERVDALYREIVVAGTHKAESIRVAEAAKVIENSQRDINIALINELAKIFNRMDIDTEAVLRA
AGTKWNFLNFRPGLVGGHCIGVDPYYLTHKAEQLGYHPEILLAGRRLNDGMGSYVASQMVKSMLKRRMAVADARVLVMGL
TFKENCPDLRNTRVIDVVRCLEEFGLTVDVHDPHADPDEARAEYGVDLVAEPQAGSYDGMVLAVAHQEFRDMGAAQIRAL
GRADALLYDLKYVLTPDQSDLRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-133 62
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-133 62
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-109 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGA1_262p02300 YP_006575230.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 1e-133 62