|
Name : kpsC (PGA1_c08880) Accession : YP_006572333.1 Strain : Phaeobacter gallaeciensis DSM 17395 Genome accession: NC_018290 Putative virulence/resistance : Virulence Product : capsule polysaccharide export protein KpsC Function : - COG functional category : - COG ID : - EC number : - Position : 916284 - 918314 bp Length : 2031 bp Strand : - Note : - DNA sequence : ATGACGGGACACCACCCGACAACCAAGGCCGGGGGCGCGCGCTCCCGGCTTTTTTATTACAACGCCGGCTTCCTGCGTCA GAAGCGGCTGCGGCGTATCCTGTCGCTGGCCGGCTATGACCTGCGCCTGGGCAAACCAACCGCCGATGATCTGGTCGCGG TCTGGGGCAATGCAGATACCGCCCATCGTGGCCATGCTGTGGCAGAGGCGCAGGGCTGTGGCCTGTTGCGGGTCGAGGAC GCTTTTCTCCGCTCAATCCATCCCGGCCGGGCGGGGGAGCCACCGTTGGGACTGTTGCTGGACCGCTCCGGGTTGCATTT TGACCCCGCTACCCCGTCCGATCTGGAGCAGCTGCTGGCCTCACATCCGCTGGATGACAGCGCATTGATGCGGCGCGCCC GGCGCGCCATCGCGCGGCTGCAGGACGCCCATCTGAGCAAATACAACGCCTATTCGCCACAGGCACCGGTCCCTGATCCC GGCTACGTGCTGGTGATCGATCAGGCCCGTGGCGATGCCTCGGTCCGCGCCTCGACCCCGTTCGAGGGCACCGATCACGC GCGGTTTCAAGAGATGCTCTATTACGCGCAGGACGAACATCCAGGCGCCCGTATCATCATCAAATCTCACCCGGAGGACC GCGCGGGCCACCGCCCCGGCTACTACAGCGCCGCAGACGCGCAGGGCCGGGTTGAAATCCTTAATACGCCAGTGTCACCC TGGGCACTGCTGGAAGGCGCAATCGCCGTCTATACCGTATCGTCGCAAATGGGATTCGAGGCGATCCTTTGCGGCCACAA ACCCCGCATTTTTGGTCAGCCTTTCTATGCAGGCTGGGGCCTCAGCGAGGATGAATTCCCCATCACCCGGCGCCAGCGCA GCCTGACCCGCGCGCAGCTGTTTGCAGCCGCGATGATCCTTTATCCCACATGGTACAGTCCCCATCACGACCGCCTGTGC GAGCTGGAAGAGGTGATCGGCGCGCTGGAGGCGGAGACCCGCGCCTGGCAGCAGGACCGCGCCGGCTGGATCGCCTCCGG CATGCGGCTTTGGAAACGGCACCCGCTACAGACCTTTTTTGGCCGCTACCGGCGCCTGCGGTTCAGCAACAGCCCCAAGA CGGCGAAGGCAAGTGGGCGCAATTGGATGATCTGGGCCGGGCGCACCAGCACCGGGCAATCTCCCGGCGCCCATCGTGTC GAAGATGGCTTTCTGCGGTCGCGCGGCTTGGGCGCGGATCTGATACCACCGCTGTCACTGGTGGTGGACCGGCAGGGGAT CTACTACGACCCTCACCAACCCAGCGATCTGGAGGATCTGATCGCCGCCCGTGCCACCCTGACGCCCGAGCAGCAGCAGC GTGCGGAAACCCTGACCCAGCGACTGGTGCAAGACAGCCTGTCGAAATACAACCTAGGCGGCACAGTGCCGGACCTGCCG GAGGGGCATCGGGTGCTGGTCGTCGGACAGGTGGCGGATGATGCCTCGGTTCGGCTGGGCTGCGAGAAAATCGCGACCAA CGCCGATCTTTTGCGCGCCGCCCGCGCCGCAAACCCGGGCGCGGTGCTGATCTACAAACCCCACCCCGATGTGGAGGCCG GTCTGCGGGATGGCAGCATCGCCGCAGAGCAGCTGGCCGATGTGGTGGTGCCCGACAGCGACCCGATGGCGCTTTTGGAT ATGGTACATGACGTTTGGACAATGACGTCGCTAATGGGGTTTGAGGCCCTGCTGCGCGGGGTGAAGGTCACAACGGTTGG CGCGCCCTTCTATGCTGGCTGGGGGCTGACCACGGATCTGGGCGCCGTCCCGGTGGCCCGACGTCAGGCACGCCCGTCGC TGATGGGGTTGGTGCACGCCGCGCTGATCGATTACCCGCGCTACATGGATCCGGTCAGCGGCCTGCCCTGTCAGGTGGAA CTGGTGGTGGAGCGACTGGCCAAAGGGGACATCCCCGCACCCGGAACCGCCAACAGAACCCTTGCCAAACTTCAGGGCCT GCTGGCCACCTACACCCACCTCTGGCGATAA Protein sequence : MTGHHPTTKAGGARSRLFYYNAGFLRQKRLRRILSLAGYDLRLGKPTADDLVAVWGNADTAHRGHAVAEAQGCGLLRVED AFLRSIHPGRAGEPPLGLLLDRSGLHFDPATPSDLEQLLASHPLDDSALMRRARRAIARLQDAHLSKYNAYSPQAPVPDP GYVLVIDQARGDASVRASTPFEGTDHARFQEMLYYAQDEHPGARIIIKSHPEDRAGHRPGYYSAADAQGRVEILNTPVSP WALLEGAIAVYTVSSQMGFEAILCGHKPRIFGQPFYAGWGLSEDEFPITRRQRSLTRAQLFAAAMILYPTWYSPHHDRLC ELEEVIGALEAETRAWQQDRAGWIASGMRLWKRHPLQTFFGRYRRLRFSNSPKTAKASGRNWMIWAGRTSTGQSPGAHRV EDGFLRSRGLGADLIPPLSLVVDRQGIYYDPHQPSDLEDLIAARATLTPEQQQRAETLTQRLVQDSLSKYNLGGTVPDLP EGHRVLVVGQVADDASVRLGCEKIATNADLLRAARAANPGAVLIYKPHPDVEAGLRDGSIAAEQLADVVVPDSDPMALLD MVHDVWTMTSLMGFEALLRGVKVTTVGAPFYAGWGLTTDLGAVPVARRQARPSLMGLVHAALIDYPRYMDPVSGLPCQVE LVVERLAKGDIPAPGTANRTLAKLQGLLATYTHLWR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsC | YP_854335.1 | capsule polysaccharide export protein KpsC | Not tested | PAI I APEC-O1 | Protein | 4e-82 | 41 |
| kpsC | AAZ04470.1 | capsule polysaccharide export protein | Virulence | PAI I APEC-O1 | Protein | 3e-82 | 41 |
