Gene Information

Name : fliI (PGA1_c35840)
Accession : YP_006574938.1
Strain : Phaeobacter gallaeciensis DSM 17395
Genome accession: NC_018290
Putative virulence/resistance : Virulence
Product : flagellum-specific ATP synthase FliI
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 3753082 - 3754410 bp
Length : 1329 bp
Strand : +
Note : -

DNA sequence : 
ATGATCTCAGCCATCAACGCATTGACCCAGGATTTGGCGAACAAGAAACTGTCGTCAGCCGTGGGGCGCGTGTCGGAAAT
TTCAGGCGGAGCGATCACGGTATCGGGGTTGAATGGTCAGGCGCGTATAGGGGATCGGTTGATCCTTCGTCGGGCGGGGA
GTGACCCGTTAGAAGGTGAGGTTATGCGAATTTCCGGTAGCGAAGTCAGCATGTTACCAGATACAGCGCCGGATCGCGTT
GCTGTCGGGGATGCCGTCCTGTTGCATCCAACCCCGGATTTCGCCCCGGCTGACAGTTGGATCGGACGCGTGATTGATCC
CTTCGGTGCGCCTCTGGACGGACGGCCGATGATGCGTGGCGAGGCAACGCGGGACCTGATGGCAGCGCCACCAAAAGCCG
CCTCACGCCGTCCGATGGGGGAACGACTCGCCACCGGTCTTGCGGTTTTCAATACGATTCTGCCGATCGTAAAAGGGCAG
CGCGTCGGTCTTTTTGCCGGGTCAGGTGTGGGGAAATCTACGCTGTTGGCCACATTGGCACAGAATATGGAAGCTGATGT
CGTCGTCATCGCGCTGATCGGGGAGAGGGGACGTGAAGTCAACCACTTCGTAAAGGACGTCCTGGGCGATGAGGGGATGC
AGCGTGCAGTTGTCGTCGCAGCTACGTCGGACCAATCGGCGCTGGTGCGCCGCCGCTGTGCTTGGTCGGCGATGGCTGTG
GCGGAGCATTTTCGAGATCAGGGAAAAAATGTGCTGTTTCTGGCAGATTCGGTGACCCGATTTGCCGAAGCGCATCGCGA
GATCGCCGTTTCATCTGGCGAAGCGCCGGCCCTGCGTGGATACCCGCCGTCGGTGACACCCCTGATTACCGGTCTCTGCG
AGCGTGCGGGACCTGGCAGTGGCGACCAGGGCGATATCACCGCGATTTTCAGCGTGCTGGTCGCAGGTTCCGACATGGAT
GAACCGATTGCCGATATTCTACGGGGCGTTCTGGATGGGCATATCGTGCTCAACCGTGAGATTGCGGAGCGAGGACGGTT
CCCGGCTGTGGATGTTTCCCGGTCGGTCTCCAGAAGCCTGCCCGCGGCCGCAACAGCGGATGAAAATTCAGCGATTCTGG
ATGTCCGCAAATATCTCGGCGCTTATGAGCAATCAGAGGTCATGATCCGCGCGGGCCTTTATTCCGAAGGCAATGACGTT
ACGCTGGATCAGGCTGTGAAGCTCTGGCCAGAGTTGGATTCGTTCTTCGGCAGGTCAGATCCTGAAGGGGTACAAAGCAG
CTTCAATCGCCTGATGCTGATGATGCGACGTGCCGTGGCCATTCGGTAA

Protein sequence : 
MISAINALTQDLANKKLSSAVGRVSEISGGAITVSGLNGQARIGDRLILRRAGSDPLEGEVMRISGSEVSMLPDTAPDRV
AVGDAVLLHPTPDFAPADSWIGRVIDPFGAPLDGRPMMRGEATRDLMAAPPKAASRRPMGERLATGLAVFNTILPIVKGQ
RVGLFAGSGVGKSTLLATLAQNMEADVVVIALIGERGREVNHFVKDVLGDEGMQRAVVVAATSDQSALVRRRCAWSAMAV
AEHFRDQGKNVLFLADSVTRFAEAHREIAVSSGEAPALRGYPPSVTPLITGLCERAGPGSGDQGDITAIFSVLVAGSDMD
EPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSRSLPAAATADENSAILDVRKYLGAYEQSEVMIRAGLYSEGNDV
TLDQAVKLWPELDSFFGRSDPEGVQSSFNRLMLMMRRAVAIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-62 45
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-60 43
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 3e-61 43
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-61 43
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-59 43
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-59 43
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-54 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-54 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-54 42
escN AAC38383.1 EscN Virulence LEE Protein 2e-57 42
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-57 41
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-57 41
escN AAC31513.1 L0034 Virulence LEE Protein 2e-57 41
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-57 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_006574938.1 flagellum-specific ATP synthase FliI VFG0192 Protein 5e-59 44
fliI YP_006574938.1 flagellum-specific ATP synthase FliI VFG2331 Protein 8e-65 44
fliI YP_006574938.1 flagellum-specific ATP synthase FliI VFG0515 Protein 2e-61 43
fliI YP_006574938.1 flagellum-specific ATP synthase FliI VFG1254 Protein 2e-65 42
fliI YP_006574938.1 flagellum-specific ATP synthase FliI VFG0730 Protein 1e-57 42
fliI YP_006574938.1 flagellum-specific ATP synthase FliI VFG0812 Protein 1e-57 41