|
Name : PGA1_c30150 (PGA1_c30150) Accession : YP_006574389.1 Strain : Phaeobacter gallaeciensis DSM 17395 Genome accession: NC_018290 Putative virulence/resistance : Unknown Product : oligopeptide/dipeptide ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 3151782 - 3153392 bp Length : 1611 bp Strand : - Note : - DNA sequence : ATGGGCAATTCGATGACCGTAACTCAAAAACCCACCCCGTTGCTGAGTGTCCGGGATCTCCGTGTCTCCTTTCGCCAGGA TGGCAAGGTGACGGAGGCGGTACGCGGTGTCTCTTTTTCCGTGGGTCGTGGGGAAACGGTCGCGTTGGTGGGGGAGAGCG GCTCTGGCAAATCGGTTTCGGCGCTGTCGACGGTCTCACTGCTGGGCGATAGCGCCACAGTGAGCGGTTCCGTTACCTAT GATGGTACCGAGATGGTCGGCGCCAGTGAGCGCCATCTGCGGCAGGTGCGAGGCAACGATATCAGCTTTATCTTTCAAGA GCCGATGACCTCTCTCAACCCGCTGCATACGATTGAGAAACAGTTGGCGGAGTCCCTTGCCTTGCATCAGGGGCTGGGTG GTGCAGCGGCACGGGAGCGGATTGTGGATCTGCTGAACCGGGTTGGTATCCGGGACGCGGAGACCCGTCTCGACGCGTAT CCGCATCAGCTTTCCGGCGGGCAGCGACAGCGGGTGATGATTGCCATGGCCCTTGCCAACAAACCCGATATCCTGATCGC TGATGAGCCGACAACCGCCCTTGATGTCACTATTCAGGTGCAGATCCTCGACCTGCTTGCGGATCTGAAAGCCAGCGAGG GTATGGGGTTGCTGTTCATCACCCATGATCTGAGCATTGTGCGCCGGATCGCGGATCGCGTCTGCGTTATGCAGGCCGGT GAGATCGTTGAAAGCGGCCCAACGGCTGAGATTTTTGCCAATCCGCAGCATCCCTATACGCGCAAGCTGCTGGACGCGGA GCCGACCGGCCAGCCTCAACCGGTGTCAAAGGACGCGAAGGAGCTGATCCGGACTGAGGATCTGAAGGTCTGGTTTCCCA TTCAAAAGGGTTTTCTGAAACGCACCGTCGGCCATGTGAAGGCGGTGAATCCGACGTCTCTGTCAGTCCGCGCGGGTGAA ACGTTGGGCATTGTTGGCGAAAGCGGCAGCGGCAAAACCACGTTGGCGTTGGCCATTATGCGTCTCATCGCCTCGGAGGG GCGAGTTGAGTTTCAGGGACAGGATCTGCGGCAATGGTCGACCCGTGATTTACGCCGGTTGCGGGCAGATATGCAGATCG TGTTCCAGGACCCCTTTGGGGCGCTCAGCCCGCGGATGACCTGTGCTCAGATTATTGCCGAAGGGTTGGCTATTCACAAC GTCGATCAGGACCGTGATCCGCGGGATCTGGTTGCTGAGGTGATGAGTGAGGTGGGGCTGGATCCGGCATTTATGGACCG CTATCCGCATGAATTCTCAGGTGGTCAGCGGCAGCGGATTGCGATTGCGCGGGCGATGGTGCTGCGACCTAAACTGGTGG TTCTGGATGAACCGACCTCGGCACTGGACATGACGGTGCAGGTTCAGATCGTCAATCTGTTGCGCGACCTGCAGGAGCGG TATGGGCTTGCGTATCTTTTTATCTCACATGATCTGAATGTAGTGCGGGCCATGTCGCACAAGATGATCGTGATGAAGCA AGGTGATGTGGTTGAGGCAGGCTCTGCGGCTGAGCTGTTCAACAATCCATCGGATCCTTACACGCAGCAACTTCTTGCTG CGGCCGGATAG Protein sequence : MGNSMTVTQKPTPLLSVRDLRVSFRQDGKVTEAVRGVSFSVGRGETVALVGESGSGKSVSALSTVSLLGDSATVSGSVTY DGTEMVGASERHLRQVRGNDISFIFQEPMTSLNPLHTIEKQLAESLALHQGLGGAAARERIVDLLNRVGIRDAETRLDAY PHQLSGGQRQRVMIAMALANKPDILIADEPTTALDVTIQVQILDLLADLKASEGMGLLFITHDLSIVRRIADRVCVMQAG EIVESGPTAEIFANPQHPYTRKLLDAEPTGQPQPVSKDAKELIRTEDLKVWFPIQKGFLKRTVGHVKAVNPTSLSVRAGE TLGIVGESGSGKTTLALAIMRLIASEGRVEFQGQDLRQWSTRDLRRLRADMQIVFQDPFGALSPRMTCAQIIAEGLAIHN VDQDRDPRDLVAEVMSEVGLDPAFMDRYPHEFSGGQRQRIAIARAMVLRPKLVVLDEPTSALDMTVQVQIVNLLRDLQER YGLAYLFISHDLNVVRAMSHKMIVMKQGDVVEAGSAAELFNNPSDPYTQQLLAAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-87 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-87 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 7e-87 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-87 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-105 | 43 |
