Gene Information

Name : ugpC1 (PGA1_c02740)
Accession : YP_006571726.1
Strain : Phaeobacter gallaeciensis DSM 17395
Genome accession: NC_018290
Putative virulence/resistance : Resistance
Product : sn-glycerol-3-phosphate import ATP-binding protein UgbC
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.20
Position : 262301 - 263347 bp
Length : 1047 bp
Strand : +
Note : -

DNA sequence :
ATGGCTCAGGTTACCCTGAATTCTGTACGCAAGGTCTACCCTAACGGGGTTGAGGCCGTCACTTCCTCCAGCTTCAAGAT
TGAGGACGGCGAATTCGTCGTTCTGGTCGGCCCGTCGGGCTGCGGCAAATCCACCTTGCTGCGCATGATTGCCGGTCTAG
AGGATATCACCGAAGGTACGCTGGAAATCGGCGACCGGGTGGTCAACAATGTCGATCCGGCAGATCGCGATATCGCGATG
GTGTTCCAGAACTACGCGCTTTATCCGCATATGACGGTGCGCAAGAACATCGCCTATGGCCTGAAGAACCGCAAAACCCC
CGAGGCTGAGATCAAGCAGAAGGTGGCCGAGGCCGCCAAGATGCTGAACCTCGAGGAATATCTGGACCGAAAACCTTCGC
AGTTGTCCGGTGGACAACGCCAGCGGGTTGCCATGGGGCGCGCTATCGTGCGTGACCCGGCATTGTTCCTGTTCGACGAA
CCGCTGTCGAACCTTGATGCCAAGCTGCGTAACCAGATGCGGATTGAGATCAAGGCATTGCAGCGCCGGTTGGGGGTCAC
CTCGATCTATGTGACCCACGATCAGGTCGAAGCGATGACTATGGCGGATCGCATCATCGTGCTGAACGGTGGCCGTATCG
AACAGATCGGCACGCCGTCGGAGATCTACCACAATCCGGCGTCCGTCTTTGTGGCCTCGTTCATGGGCGCGCCGCCGATG
AATCTACTCGACGCCACCATAGCCAACGGCCAGGTGACATTGCCGGATGGGGTCTCGATGGGCGCGCTGGACACCTCGGC
CCAAGGGGCGGTTAAGCTGGGTATCCGCCCGGAGGACGTCCAACTGGTCGCCGAAGGTGGCCTCGCCATCGATGTGGAAC
TGATCGAAGAACTGGGCGCCCATCGTCTGTTGCATGGCAAACTGGGGGGCCAACCCTTCACCATTCATGTGCTGAAAGAC
ATTCCGGTTGATCCCGGCACCCATCAGATTTCGGTCGATCCTGCAGCGATCTGCCTGTTTGATGCGGAAAGCGGCCAGCG
ACGATGA

Protein sequence :
MAQVTLNSVRKVYPNGVEAVTSSSFKIEDGEFVVLVGPSGCGKSTLLRMIAGLEDITEGTLEIGDRVVNNVDPADRDIAM
VFQNYALYPHMTVRKNIAYGLKNRKTPEAEIKQKVAEAAKMLNLEEYLDRKPSQLSGGQRQRVAMGRAIVRDPALFLFDE
PLSNLDAKLRNQMRIEIKALQRRLGVTSIYVTHDQVEAMTMADRIIVLNGGRIEQIGTPSEIYHNPASVFVASFMGAPPM
NLLDATIANGQVTLPDGVSMGALDTSAQGAVKLGIRPEDVQLVAEGGLAIDVELIEELGAHRLLHGKLGGQPFTIHVLKD
IPVDPGTHQISVDPAAICLFDAESGQRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugpC1 YP_006571726.1 sn-glycerol-3-phosphate import ATP-binding protein UgbC BAC0604 Protein 8e-43 42