Gene Information

Name : gabD2 (PGA1_c23170)
Accession : YP_006573720.1
Strain : Phaeobacter gallaeciensis DSM 17395
Genome accession: NC_018290
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehdyrogenase GabD
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.16
Position : 2402485 - 2403909 bp
Length : 1425 bp
Strand : +
Note : -

DNA sequence :
ATGGAATATACCGATCTCTACATCAACGGTGCCTGGCACAAAACATCCGAACGCTTTGACGTCATCAACCCCGCCACCGA
AGAGGTCCTCGCCTCTGTGGCCTCTGCCGATATCGCAGATGCGGATGCGGCCCTTGATGCCGCCGAAGCGGCAATGAAGG
ACTGGGCCGCCCGCACGCCGCGCCAACGCTCCGAAGTATTGCGCAAAGCGTGGGAGCTAATGACGAAGCGGTTGGATTAT
TTCGCCAACCTTATCACGCTGGAAAACGGCAAGGCGGGCACTGACGCGAAAGGCGAGGCAACCTATGCGGCAGAGTTTTT
CCGCTGGTTTGCCGAAGAAGCGGTGCGCGCTGACGGGATGATCACCCACGCGCCTGCGTCCGGCGCGCGGATCGTGGTGC
AGCACAAACCGGCCGGTCTGGCCGTGCTGGTGACGCCGTGGAACTACCCTGCCGCCATGGGCACCCGCAAGATCGCTCCG
GCGCTGGCCGCGGGCTGCGGCGTCATTATCAAGCCGGCCTCGGAGACGCCGTTGACCATGCTGGCGCTGATGCCGCTTCT
GGAAGAAGCGGGCGTTCCTGCGGGGCTGGTGAACGTCCTGCCCAGCCGCAAGACTGGGTCCTTGGTAGACCACATGCTGC
ACGACCCGCGCATTCGCGTGGTCAGCTTCACAGGGTCCACCGGTGTGGGCCGCAAGCTGCTGAAAGGGGCCGCCGATCAG
GTGTTGAAACCCGCGATGGAGCTGGGAGGCAACGCCCCCGTGGTGGTCTTTGAGGACGCCGATATGGACGTGGCGATCGA
AGGCACAATGCTGGCCAAAATGCGCAACCTTGGTGAAGCCTGCACCGCCGCCAACCGCATCTATGTGCATGAGGATATTG
CCGATGAGTTCACCAAACGCCTGAGCGCCGCGATGTCCGCTCTCAAGGTGGGCGACGGCACAGACCCAAGCGTTGACGTC
GGTCCTCTGGTCAACGCCGATACGCGCGACAAGGTCGCAGCCTTCGTAGCCGACGCCGTGGCTAAGGGCGCCAAGGTCGA
ATGCGGCGGGACCACACCAAACGGCAAGGGATTTTACTATCCACCGACAGTCCTGTCGAACGTGTCCGAAGATGCCGAAT
GCGTGCGCGACGAGATTTTTGGTCCCGTTGCCGCGATCCAGACGTTTACCAATCAGGACGAGGTCATCGCGCGGGCCAAT
GATACTGAATATGGCCTTGTGGCCTATGTCTTCTCGGAAGATTTCAAACGGGCGCTACAGGTGTGCGAACAGCTGGAATA
CGGCATGGTAGGCCTGAACCGCGGGCTCGTGTCGGACCCTGCGGCACCCTTTGGCGGTGTCAAGCAATCGGGCCTTGGCC
GCGAGGGCGGACATGAAGGCATGCTTGAGTTCATGGAAACGCAATACATTTCGGCCAGCTGGTAA

Protein sequence :
MEYTDLYINGAWHKTSERFDVINPATEEVLASVASADIADADAALDAAEAAMKDWAARTPRQRSEVLRKAWELMTKRLDY
FANLITLENGKAGTDAKGEATYAAEFFRWFAEEAVRADGMITHAPASGARIVVQHKPAGLAVLVTPWNYPAAMGTRKIAP
ALAAGCGVIIKPASETPLTMLALMPLLEEAGVPAGLVNVLPSRKTGSLVDHMLHDPRIRVVSFTGSTGVGRKLLKGAADQ
VLKPAMELGGNAPVVVFEDADMDVAIEGTMLAKMRNLGEACTAANRIYVHEDIADEFTKRLSAAMSALKVGDGTDPSVDV
GPLVNADTRDKVAAFVADAVAKGAKVECGGTTPNGKGFYYPPTVLSNVSEDAECVRDEIFGPVAAIQTFTNQDEVIARAN
DTEYGLVAYVFSEDFKRALQVCEQLEYGMVGLNRGLVSDPAAPFGGVKQSGLGREGGHEGMLEFMETQYISASW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 1e-74 47
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 2e-74 46