Gene Information

Name : mdeA (PGA1_c16600)
Accession : YP_006573083.1
Strain : Phaeobacter gallaeciensis DSM 17395
Genome accession: NC_018290
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase MdeA
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.11
Position : 1726261 - 1727466 bp
Length : 1206 bp
Strand : -
Note : -

DNA sequence : 
ATGACCAAATCCGGCTCCAGCTTTTCCACACGCGCAATCCACCATGGCTATGACACGCAGTCGCAGCAGGGATCGCTGAA
CCCGCCGCTCTATCTGACGTCGACGTTCACCTTCGATTCCGCCGAGGCCGGTGGCGAGATGTTCACGGGTGAGCGCGAGG
GGCATTTCTACAGCCGGATCTCCAACCCGACGCTGGACCATCTGGAGCAGCGCATTGCCAATCTGGAAGGGGGCGAAGCA
GGGCTCGCCACGGCGTCCGGCATGGGTGCGATCACTTCGACGCTGTGGTCGTTCCTTGCGGCGGGTGACGAGATCATCCT
CGACAAGACACTCTATGGCTGCACCTTCTCCTTCATGACCCATGGTCTGCCGCGTTTTGGTGTGAAGGTGCGCCTGGTGG
ATATGACAGATCCGACCAATCTGGCAGAGGCGATCAGCCCCAAGACCAAGCTGGTCTATTTCGAGACGCCGGCGAATCCC
AATAATCGCTTGATCGACATTGCTGCGATTTCCGAGATTGCGCACAAAGCCGGTGCCAAAGTGGTGGTCGACAACACCTT
TGCCACGCCGGTCCTCACGCGACCGATCGAACTGGGCGCAGATATCGTGGTGCATTCGGCAACCAAATTCATCAGTGGTC
ATGGCGATGTCATCGCGGGGCTGGTGGTGGGCTCCAAGGAGGAAATCACCCAGATCCGTCTGGTGGGGCTGAAGGATATG
ACTGGTGCGGTCATGTCACCCTTCAGCGCAATGCTACTGATGCGCGGCCTGAAGACGCTGGAACTGCGCATGGAGCGCCA
TTGCAAATCCGCACTGAAAGTCGCTGAGGCACTGCAAGCGCATCCTGCGGTGGAGCGGGTCTATTATCCAGGCCTTGATG
ATTTTGCTCAGGGCGATCTTGCACGGCGGCAGATGTCGGGCTTTGGTGGCATGATCCCGTTTGAGGTTGTCGGCGGCAAG
GCGGGCGGTATCGCCATGATGAACCGGCTGGCGATGATCCAGCGCGCGGTCTCGCTAGGTGATGCGGAGACCCTGATCCA
ACACCCGGCCAGCATGACCCATTCGACCTACACCCCTGAGGAACGCGCCGAACATGGCATCGCTGAGGGTCTGGTGCGGA
TGTCGGTAGGGCTTGAAGGTGTCGACGATATCATCGACGATCTGATGCAGGCGCTGTCCTCGCATAACGCCTACGCCGCT
GCCTGA

Protein sequence : 
MTKSGSSFSTRAIHHGYDTQSQQGSLNPPLYLTSTFTFDSAEAGGEMFTGEREGHFYSRISNPTLDHLEQRIANLEGGEA
GLATASGMGAITSTLWSFLAAGDEIILDKTLYGCTFSFMTHGLPRFGVKVRLVDMTDPTNLAEAISPKTKLVYFETPANP
NNRLIDIAAISEIAHKAGAKVVVDNTFATPVLTRPIELGADIVVHSATKFISGHGDVIAGLVVGSKEEITQIRLVGLKDM
TGAVMSPFSAMLLMRGLKTLELRMERHCKSALKVAEALQAHPAVERVYYPGLDDFAQGDLARRQMSGFGGMIPFEVVGGK
AGGIAMMNRLAMIQRAVSLGDAETLIQHPASMTHSTYTPEERAEHGIAEGLVRMSVGLEGVDDIIDDLMQALSSHNAYAA
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 4e-62 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 6e-63 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mdeA YP_006573083.1 methionine gamma-lyase MdeA BAC0207 Protein 7e-121 63