Gene Information

Name : PGA1_c13010 (PGA1_c13010)
Accession : YP_006572737.1
Strain : Phaeobacter gallaeciensis DSM 17395
Genome accession: NC_018290
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1345689 - 1346366 bp
Length : 678 bp
Strand : +
Note : -

DNA sequence : 
ATGCGAATACTCTTGCTGGAAGATGATCCCGAAATCGGGACCTGGACGGTCAAGGGCCTCACGGCCGCAGGCCATGTGGT
TGATTGGATTGAAAACGGCCGTGAGGCGCTGCTGGCCGCGACGACGCGGGACTACGATGTGCTGGTCTTCGATCGAATGA
CGCCGGACTTGGACGGGTTGTCGGCGTTGAAAACATTGCGCTCGGCGCGCATTACCACGCCCTTGATCCTGCTCACCGCC
CTTGGTGCAGTGGAGGACCGGGTCGAGGGGCTTGAGGCCGGCGCGGATGACTATCTCAGCAAGCCCTTTGCCATGACCGA
GCTTCTGGCCCGGATCACCGCCCTTGGTCGTCGCGGGCGGGCCGAGGCCGCAGAAACAGCGACGCGGCTCTCGCATCGCG
GGCTTGATCTGGATTTGCTTAGTCAGACCTGCGCCTGCAACGGGACAACCGTGTTGCTGAACCCCAAGGAGTTTCGCCTG
CTAGAGGTTCTGATGCGCTCCAAGGGGCGGATCCAGACCCGGGCGATGCTGCTGGAGCGGGTCTGGGATATCAATTTCGA
TCCGTCCACCAGTGTTGTCGAAACCCATATGAGCCGCCTGCGTAACAAGATTGAAAAACCGTTCGGGCTGGAGTTCATCA
AAACCGTGCGCGGGTCGGGGTATATGTTCATTGATTAG

Protein sequence : 
MRILLLEDDPEIGTWTVKGLTAAGHVVDWIENGREALLAATTRDYDVLVFDRMTPDLDGLSALKTLRSARITTPLILLTA
LGAVEDRVEGLEAGADDYLSKPFAMTELLARITALGRRGRAEAAETATRLSHRGLDLDLLSQTCACNGTTVLLNPKEFRL
LEVLMRSKGRIQTRAMLLERVWDINFDPSTSVVETHMSRLRNKIEKPFGLEFIKTVRGSGYMFID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-34 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-34 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGA1_c13010 YP_006572737.1 two-component system response regulator BAC0111 Protein 1e-38 46
PGA1_c13010 YP_006572737.1 two-component system response regulator BAC0638 Protein 9e-33 46
PGA1_c13010 YP_006572737.1 two-component system response regulator BAC0197 Protein 5e-38 45
PGA1_c13010 YP_006572737.1 two-component system response regulator BAC0125 Protein 9e-37 43
PGA1_c13010 YP_006572737.1 two-component system response regulator BAC0347 Protein 7e-34 43
PGA1_c13010 YP_006572737.1 two-component system response regulator BAC0083 Protein 3e-37 43
PGA1_c13010 YP_006572737.1 two-component system response regulator BAC0308 Protein 7e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGA1_c13010 YP_006572737.1 two-component system response regulator VFG0596 Protein 1e-34 44
PGA1_c13010 YP_006572737.1 two-component system response regulator VFG1389 Protein 1e-25 41