|
Name : clpB (MSMEI_0716) Accession : YP_006565491.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_018289 Putative virulence/resistance : Virulence Product : Chaperone protein clpB Function : - COG functional category : - COG ID : - EC number : - Position : 819252 - 821798 bp Length : 2547 bp Strand : + Note : - DNA sequence : GTGGACTCGTTCAACCCGACGACCAAGACTCAGGCGGCGCTGACCTCGGCGTTGCAGGCGGCGAGTTCCGCTGGCAACCC GGAGATCCGCCCCGCGCATTTGCTGATGGCATTGCTGACCCAGAATGACGGCATTGCCGCACCCCTGCTGGAGGCCGTCG GCGTCGAGCCCGCGACGATCCGCACCGAGACCCAGCGGTTGCTCGACCGTCTGCCCAGCGCCTCGGGCGCGAGCAGCCAG CCCCAGCTCAGCCGCGAATCGCTCGCGGCGATCACCACGGCCCAGAACCTGGCCACCGAGATGGACGACGAGTACGTCTC GACCGAGCACCTGATGGTCGGCCTGGCCACGGGTGACTCCGAGGTGGCCAAGCTGCTGACCGGACACGGCGCGTCGCCGC AGGCTCTGCGTGAGGCGTTCGTCAAGGTGCGCGGCAGCGCCCGGGTGACCAGCCCGGACCCGGAGGGCACGTATCAGGCG CTGGAGAAGTACTCCACCGACCTGACCGCGCGTGCCCGCGAGGGCAAGCTCGACCCGGTGATCGGGCGCGACAACGAGAT TCGTCGTGTCGTACAGGTGCTGAGCCGTCGTACCAAGAACAATCCGGTGCTCATCGGCGAGCCGGGCGTCGGTAAGACGG CCATCGTCGAGGGCCTCGCGCAGCGCATCGTCGCCGGCGACGTGCCCGAAAGCCTGCGCGACAAGACCGTCATCGCACTG GATCTCGGTTCGATGGTGGCCGGTGCGAAGTACCGCGGTGAGTTCGAGGAGCGGCTGAAGGCCGTGCTCGACGACATCAA GAACTCGGCCGGGCAGGTCATCACGTTCATCGACGAGCTGCACACCATCGTCGGCGCCGGTGCCACCGGTGAGTCGGCGA TGGACGCGGGCAACATGATCAAGCCGATGCTGGCCCGCGGCGAGCTGCGGCTGGTCGGTGCCACCACGCTCGACGAGTAC CGCAAGTACATCGAGAAGGACGCCGCATTGGAGCGCCGGTTCCAGCAGGTGTTCGTCGGTGAACCCTCGGTCGAGGACAC CGTCGGCATCCTGCGTGGTCTGAAGGACCGCTACGAGGTGCACCACGGCGTGCGGATCACCGACTCGGCGTTGGTGGCCG CGGCGACGCTCTCCGACCGGTACATCACCGCGCGGTTCCTTCCGGACAAGGCCATCGACCTGGTCGATGAGGCCGCGTCC CGGCTGCGCATGGAGATCGACTCGCGCCCAGTTGAAATCGACGAGGTCGAGAGGTTGGTACGGCGCCTGGAGATCGAGGA GATGGCGCTTGAGAAAGAAGAGGACGAGGCGTCCAAGGACCGGCTGGAGAAGCTGCGCGCCGAACTGGCCGACCACAAGG AGAAGCTGTCCGAGCTGACCACGCGGTGGCAGAACGAGAAGAACGCCATCAACGTCGTTCGCGAGCTCAAGGAGCAACTG GACACGTTGCGCGGCGAGGCCGACCGTGCCGAGCGTGACGGTGACCTGGCCAAGGCGGCCGAACTGCGGTACGGCCGAAT CCCGGAGGTGGAGAAGAAGCTCGACGCTGCCCTTCCCGCCGCCGAGGCCCGCGAGAACCTGATGCTCAAGGAGGAGGTCG GCCCCGACGACATCGCCGAGGTGGTGGAGGCGTGGACCGGTATCCCGTCCGGCCGCATGCTCGAAGGCGAGACCGCCAAG CTGCTCCGCATGGAGGAGGAGCTGGGCAAGCGTGTCGTCGGGCAGCGCAAGGCCGTGCAGGCCGTCAGCGACGCGGTGCG GCGCAGCCGTGCCGGGGTGGCCGACCCCAACCGGCCGACGGGTTCGTTCATGTTCCTGGGCCCGACCGGTGTGGGTAAGA CCGAGCTCGCAAAGGCGTTGGCGGAGTTCTTGTTCGACGACGAGCGTGCGATGGTCCGCATCGACATGAGCGAGTACGGC GAGAAGCACTCGGTGGCTCGGCTGGTCGGTGCGCCTCCCGGCTACATCGGTTACGACCAGGGCGGTCAGCTGACCGAGGC GGTGCGGCGGCGTCCGTACACGGTGATCCTGTTCGACGAGATCGAAAAGGCGCACCCGGACGTGTTCGACGTGCTGCTGC AGGTGCTCGACGAGGGCCGGTTGACCGACGGCCAGGGCCGCACGGTCGACTTCCGCAACACCATCCTCATCCTGACGTCC AACCTGGGCGCGGGCGGTAACGAGGACCAGGTGATGGCGGCGGTGCGCTCGGCGTTCAAGCCCGAGTTCATCAACCGGCT GGACGACGTCATCATCTTCGACGGGCTCAATCCCGAAGAGCTGGTGCAGATCGTCGACATCCAGTTGGCGCAGCTGGCCA AGCGTCTGGAGCAGCGGCGACTCACCCTCGAGGTGTCGCTGCCGGCCAAGAAGTGGCTGGGGCAGCGCGGTTTCGACCCG CTGTACGGTGCCCGTCCGCTGCGCCGGTTGGTGCAGCAGGCCATCGGCGACCAGTTGGCCAAGATGCTGCTGGCCGGCGA GGTGCACGACGGCGACATCGTGCCGGTGAACGTCAGCCCCGACGGCGAGTCCCTCGTTTTGGGCTGA Protein sequence : MDSFNPTTKTQAALTSALQAASSAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATIRTETQRLLDRLPSASGASSQ PQLSRESLAAITTAQNLATEMDDEYVSTEHLMVGLATGDSEVAKLLTGHGASPQALREAFVKVRGSARVTSPDPEGTYQA LEKYSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTVIAL DLGSMVAGAKYRGEFEERLKAVLDDIKNSAGQVITFIDELHTIVGAGATGESAMDAGNMIKPMLARGELRLVGATTLDEY RKYIEKDAALERRFQQVFVGEPSVEDTVGILRGLKDRYEVHHGVRITDSALVAAATLSDRYITARFLPDKAIDLVDEAAS RLRMEIDSRPVEIDEVERLVRRLEIEEMALEKEEDEASKDRLEKLRAELADHKEKLSELTTRWQNEKNAINVVRELKEQL DTLRGEADRAERDGDLAKAAELRYGRIPEVEKKLDAALPAAEARENLMLKEEVGPDDIAEVVEAWTGIPSGRMLEGETAK LLRMEEELGKRVVGQRKAVQAVSDAVRRSRAGVADPNRPTGSFMFLGPTGVGKTELAKALAEFLFDDERAMVRIDMSEYG EKHSVARLVGAPPGYIGYDQGGQLTEAVRRRPYTVILFDEIEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILILTS NLGAGGNEDQVMAAVRSAFKPEFINRLDDVIIFDGLNPEELVQIVDIQLAQLAKRLEQRRLTLEVSLPAKKWLGQRGFDP LYGARPLRRLVQQAIGDQLAKMLLAGEVHDGDIVPVNVSPDGESLVLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-103 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-103 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_006565491.1 | Chaperone protein clpB | VFG2084 | Protein | 1e-110 | 44 |
