Gene Information

Name : MSMEI_6662 (MSMEI_6662)
Accession : YP_006571383.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_018289
Putative virulence/resistance : Virulence
Product : TRAP dicarboxylate transporter subunit DctM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6896244 - 6897539 bp
Length : 1296 bp
Strand : -
Note : -

DNA sequence : 
GTGTCCATCGACCCCATCGCTGTGGGAATCCTCATCGGAGGATTCGCCGTGCTCATCCTGCTGCGCATCCCGATCGCCCT
GGCGCTCGCGCTGGCGGCGGTGTTCGAGGCGTTCTATCTCGACCTGCCGCTGCCCATCGTCGGGCAACGGATGGTCGCGG
GCCTCGACATCTTCGCGCTGCTCGCCATCCCGTTCTTCATCCTCGGGGGCGAGATCATGGCCGCCGGCGGGATCTCCCGG
CGACTGATCGCGTTCGCGAGTCTGTTCGTCGGCTGGCTGCGCGGCGGCCTCGCGATGATCAACATCGGTTCCAGTACCTT
CTTCGGTGCACTGTCGGGTTCGTCGGTCGCCGACGTCTCGGCCATCGGGTCGGCGACCATCCCGATGATGAAACAGAAAG
GGTACGACGCCGATTACGCCGTCTGCGTGACCATCACCGGAGCCGCTCAGGCCGTGATGATTCCGCCCAGCCACAACCTG
GTGATCTTCTCGATGGCCGCGGGCGGGGTGTCGATCGGTGCCCTGTTCGTCGCAGGCATCGTCCCCGGTCTGCTGATCGG
CTTGTCGCTTCTGGTGCTGGCCTACCTGCTCGCCGTCCGCCGTGGGTACCCCAAGGAGACCCTCGTCCCGGTCAGTGAGG
TCCCACGCATCGTGTGGGAAGGGCTGCTGAGCCTGCTGATGCCGGTGATCATCCTCGGCGGAATCCTCAGTGGCATCTTC
ACGGCGACCGAGTCCGCGGCCATCGGCTGTGTCTACGCCTTCTTCCTGACCTTCTTCGTTTACCGCGACATCCCGCTGTC
GGGCTTCATCCCGATCCTCCAGCGCACCGCACGAACGCTCGGGATCGTGCTGTTCATCATCGCGGCGGCCGGGGCGTTCG
GGTATTTCCTGACCTTCCTCCAGGTCCCCGAGGCGGTCACCCAAGCACTATTGGGCCTCTCGGACAACAAGATCGTCATC
CTGCTGGTGATCAACCTGCTGCTGCTCGCGCTCGGCGCCGTGATGGACATGGCACCACTGATCTTGATCATGACGCCGAT
CCTGCTGCCGGTCGCCACGAGTATCGGGATGGACCCGGTCCAGTTCGGCATCATGCTGCTGCTCAACCTCGCCATCGGTC
TCATCACGCCGCCGGTCGGCAACGTCCTGTTCGTCGGGGCTGCGATCGGCCAGATCTCGATCGAGAAAGTCTCACGGGCA
CTCCCGGTGTTCCTGGTCCCCATGCTCTTGGTGCTCCTGCTCATCACGTTCCTGCCGCAGTTGTCCCTGGCCCTACCGGG
CCTGCTCGGCCTCTAG

Protein sequence : 
MSIDPIAVGILIGGFAVLILLRIPIALALALAAVFEAFYLDLPLPIVGQRMVAGLDIFALLAIPFFILGGEIMAAGGISR
RLIAFASLFVGWLRGGLAMINIGSSTFFGALSGSSVADVSAIGSATIPMMKQKGYDADYAVCVTITGAAQAVMIPPSHNL
VIFSMAAGGVSIGALFVAGIVPGLLIGLSLLVLAYLLAVRRGYPKETLVPVSEVPRIVWEGLLSLLMPVIILGGILSGIF
TATESAAIGCVYAFFLTFFVYRDIPLSGFIPILQRTARTLGIVLFIIAAAGAFGYFLTFLQVPEAVTQALLGLSDNKIVI
LLVINLLLLALGAVMDMAPLILIMTPILLPVATSIGMDPVQFGIMLLLNLAIGLITPPVGNVLFVGAAIGQISIEKVSRA
LPVFLVPMLLVLLLITFLPQLSLALPGLLGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 1e-42 42
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 1e-42 42
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 8e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEI_6662 YP_006571383.1 TRAP dicarboxylate transporter subunit DctM VFG1110 Protein 5e-43 42