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Name : clpC (MSMEI_5933) Accession : YP_006570661.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_018289 Putative virulence/resistance : Virulence Product : ATP-dependent protease ATP-binding subunit ClpC1 Function : - COG functional category : - COG ID : - EC number : - Position : 6154580 - 6157126 bp Length : 2547 bp Strand : - Note : - DNA sequence : ATGTTTGAGAGATTTACCGACCGCGCCCGCAGGGTCGTCGTCCTGGCTCAAGAAGAAGCCCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTTTTGGGACTTATTCATGAGGGCGAGGGTGTAGCGGCCAAGTCGCTCGAGTCGCTCGGGA TCTCGCTGGAAGGCGTCCGCAGCCAGGTCGAGGAGATCATCGGCCAGGGCCAGCAGGCGCCGTCGGGCCACATCCCGTTC ACGCCTCGCGCCAAGAAGGTGCTCGAGCTGAGCCTGCGCGAAGCGCTCCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGCCTGATCCGTGAGGGCGAAGGCGTCGCGGCCCAGGTGCTCGTGAAGCTGGGCGCCGAGCTGACGCGGG TGCGCCAGCAGGTCATCCAGCTGCTGAGCGGCTACCAGGGCAAGGAAGCGGCAGAAGCCGGGACCGGCGGCCGTGGTGGC GAGTCGGGCAACCCGTCGACCTCGCTCGTGCTCGACCAGTTCGGCCGCAACCTGACCGCGGCCGCGATGGAGGGCAAGCT CGATCCGGTCATCGGCCGCGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTGAGCCGGCGCACCAAGAACAACCCGGTGC TGATCGGCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTGGCGCAGGCCATCGTGCACGGCGAGGTCCCCGAG ACGCTCAAGGACAAGCAGCTCTACACCCTCGACCTGGGCTCCCTGGTCGCGGGCAGCCGCTACCGCGGTGACTTCGAGGA ACGCCTCAAGAAGGTGCTCAAGGAGATCAACACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTCGTCG GCGCGGGTGCCGCCGAGGGCGCGATCGACGCCGCGAGCATCCTCAAGCCGAAGCTGGCCCGTGGCGAGCTGCAGACGATC GGCGCCACCACGCTCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGCCGGTTCCAGCCGGTGCAGGT GGGCGAGCCGACCGTCGAGCACACCATCGAGATCCTCAAGGGTCTGCGCGACCGTTACGAGGCGCACCACCGCGTCTCGA TCACCGACTCCGCGATGGTCGCGGCGGCCACCCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCGGACAAGGCGATC GACCTGATCGACGAGGCAGGCGCGCGGATGCGCATCCGCCGCATGACCGCTCCGCCAGACCTGCGCGAGTTCGACGAGAA GATCGCCGACGCGCGCCGGGAGAAGGAGTCCGCGATCGATGCGCAGGACTTCGAGAAGGCCGCGGCTCTGCGCGACAAGG AGAAGCAGCTCGTCGCGCAGCGTGCCGAGCGTGAGAAGCAGTGGCGTTCGGGTGACCTGGACGTCGTGGCCGAGGTCGAC GACGAGCAGATCGCCGAGGTGCTGGGGAACTGGACCGGTATCCCCGTGTTCAAGCTGACCGAGGAGGAGACGACTCGGCT GCTGCGCATGGAGGAGGAGCTGCACAAGCGGATCATCGGCCAGGAGGACGCCGTCAAGGCGGTCAGCAAGGCCATCCGCC GCACGCGTGCCGGCCTGAAGGATCCCAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACC GAGCTGTCCAAGGCGCTCGCGAACTTCCTGTTCGGCGACGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGA CCGCTTCACCGCCTCGCGGCTGTTCGGTGCCCCTCCGGGCTACGTCGGCTACGAGGAGGGCGGTCAGCTCACCGAGAAGG TGCGCCGCAAGCCGTTCAGCGTCGTGCTGTTCGACGAGATCGAGAAGGCCCACCAGGAGATCTACAACAGCCTCCTGCAG GTCCTCGAGGACGGTCGCCTGACCGACGGCCAGGGTCGCACGGTGGACTTCAAGAACACGGTGCTGATCTTCACGTCGAA CCTCGGCACGTCCGACATCTCGAAGGCCGTCGGCCTGGGCTTCAGCCAGGGCGGCAGCGAGAACAACTACGAGCGGATGA AGCAGAAGGTTCACGACGAACTGAAGAAGCATTTCCGTCCGGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCAC CAGCTGACGCAGGACGAGATCATCCAGATGGTCGACCTGATGATCGGCCGGGTGTCCAACCAGCTCAAGACCAAGGACAT GGCTCTGGAGCTCTCGGACAAGGCGAAGGCGTTGCTGGCCAAGCGCGGCTTCGATCCGGTACTGGGCGCGCGCCCGCTGC GCCGCACGATCCAGCGCGAGATCGAGGACCAGCTGTCGGAGAAGATCCTGTTCGAGGAGATCGGCCCCGGTCAGCTGGTG ACGGTCGACGTCGAAGGCTGGGACGGCGAAGGCCAGGGCGAGGACGCCAAGTTCACCTTCTCGGGTGGACCCAAGCGCGC CGAGACCGCCGAGCCCGATCTGGCCGGTGCCGGAGCCGCCGGCGCCCCGACCGCAGGCACGGAGTGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGG ESGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDSAMVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAAALRDKEKQLVAQRAEREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFSQGGSENNYERMKQKVHDELKKHFRPEFLNRIDDIIVFH QLTQDEIIQMVDLMIGRVSNQLKTKDMALELSDKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEIGPGQLV TVDVEGWDGEGQGEDAKFTFSGGPKRAETAEPDLAGAGAAGAPTAGTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 82 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_006570661.1 | ATP-dependent protease ATP-binding subunit ClpC1 | VFG0079 | Protein | 0.0 | 60 |
| clpC | YP_006570661.1 | ATP-dependent protease ATP-binding subunit ClpC1 | VFG0080 | Protein | 1e-144 | 51 |
