Gene Information

Name : kdpB (MSMEI_5245)
Accession : YP_006569983.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_018289
Putative virulence/resistance : Unknown
Product : Potassium-transporting P-type ATPase B chain kdpB
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 5471795 - 5473942 bp
Length : 2148 bp
Strand : +
Note : -

DNA sequence :
ATGCCAGTCCACACCGCCCAACAGGCGGTCTCCAACCACGCGAACCCCAAACCCACCAGCCAGGTTCAGGGCGGGTTGCT
CGACCCAAAAATGTTGTGGCGTTCGCTGCCCGACGCGCTGCGCAAGCTGAACCCGCGCACCCTGTGGCGCAACCCGGTGA
TGTTCATCGTCGAGGTGGGTGCCGTGTGGTCCACGATCCTCGCGGGTGTGAACCCCACTTGGTTCGGTTGGCTGATCGTG
GCGTGGCTGTGGCTGACCGTGGTGTTCGCCAACCTCGCCGAGGCCGTCGCCGAGGGCCGCGGCAAGGCCCAGGCCGAGTC
GCTGCGCAAGACCAAGGCCGACACCATGGCACGCCGGCTCACCGAGTCGGGCGCCGAGGAAGCTGTCCCGGCACCGCAAC
TGCGGCAGGGTGACATCGTCGTCGTGGAAGCCGGCCAGACCATCCCGGGCGACGGTGACGTCGTCGAAGGCATTGCCTCG
GTCGACGAATCGGCCATCACCGGCGAATCCGCCCCGGTCATCCGGGAATCGGGTGGCGACCGTTCGGCGGTCACGGGCGG
CACCACGGTGCTCAGCGACCGCATCGTCGTGCGCATCACCCAGAAACCGGGCGAGAGCTTCATCGACCGCATGATCGCGC
TGGTCGAGGGCGCCAACCGGCAGAAGACACCCAACGAGATCGCGCTGAACATCCTGCTCGCCGCGCTGACCATCATCTTC
GTGTTCGCCGTCGCAACCCTGCAACCCTTGGCGATCTACGCCAAGGCCAACAACCCGGGTGTGCCGGACAGTCTGGCGCT
CACCGGCAACGGGATCAGCGGCATTGTCATGGTGGCGCTGCTGGTGTGCCTGATCCCGACGACCATCGGCGCGCTGCTGT
CGGCCATCGGCATCGCCGGTATGGACCGGTTGGTGCAACGCAACGTGCTCGCGATGTCGGGCCGCGCGGTCGAGGCCGCG
GGTGACGTCAACACGCTGCTGCTGGACAAGACCGGCACCATCACGCTGGGCAACCGGCAGGCCGCGGCGTTCGTACCGCT
GACCGGCGTGACACCCGAATCCCTCGCCGACGCCGCACAGCTGTCGAGCCTGGCCGACGAAACCCCCGAGGGCCGTTCGA
TCGTCGTGTTCGCCAAGCGCGAGTTCGGGTTACGCGCCCGCACCCCGGGCGAACTCGCCGAGGCGCACTGGATCGAATTC
AGCGCCACCACGAGGATGTCCGGCGTCAACCTTGGCGAGCACCGCCTGCGTAAGGGCGCCGCCGCGGCGGTCGTCGACTG
GGTCCGCGGCGAGGGCGGCACCGTACCGGTCGAGTTGTTCGACGTCGTCGACGCGATCTCACACGCCGGCGGCACACCCC
TGGTGGTCGGGCACGTCATCACCGACGACACCGACCCCAAGCGGGCCGAGGTGCTCGGCGTCATCCACCTCAAAGACGTT
GTCAAGCAAGGCATGAAGCAGCGTTTCGACGAAATGCGGCGCATGGGGATCCGCACCGTGATGATCACCGGCGACAACCC
GTTGACGGCCAAGGCCATCGCCGACGAGGCCGGAGTCGACGACTTCCTCGCCGAGGCCACCCCGGAGGACAAACTCGCGC
TGATCAAGCAGGAGCAGGCCGGTGGGCGTCTGGTCGCGATGACCGGCGACGGCACCAACGACGCACCCGCCCTGGCGCAG
GCCGACGTGGGCGTCGCGATGAACACCGGCACGTCGGCGGCCAAGGAGGCCGGCAACATGGTCGATCTGGATTCCGACCC
GACCAAGCTCATTGAGATCGTGGAGATCGGCAAGCAGTTGCTGATCACGCGTGGTGCACTGACGACGTTCTCGATCTCCA
ACGACATCGCGAAGTACTTCGCGATCATCCCGGCGTTGTTCGTCGGCCTGTTCCCCGGACTGGACCTGCTGAACATCATG
CGGTTGCACAGCCCGCAATCGGCGATCCTGTCGGCGGTGATCTTCAACGCGATCGTGATCGTCGCTCTGATCCCGTTGGC
CCTCAAGGGTGTCCGCTACACCCCGAGCAGCGCGGCGAAACTGCTCAGCCGCAACCTCTACATCTACGGCCTCGGCGGCA
TCATCGCGCCGTTCCTCGGCATCAAACTCATCGACCTGGTAGTCCAACTTCTCCCCGGGATGTCCTGA

Protein sequence :
MPVHTAQQAVSNHANPKPTSQVQGGLLDPKMLWRSLPDALRKLNPRTLWRNPVMFIVEVGAVWSTILAGVNPTWFGWLIV
AWLWLTVVFANLAEAVAEGRGKAQAESLRKTKADTMARRLTESGAEEAVPAPQLRQGDIVVVEAGQTIPGDGDVVEGIAS
VDESAITGESAPVIRESGGDRSAVTGGTTVLSDRIVVRITQKPGESFIDRMIALVEGANRQKTPNEIALNILLAALTIIF
VFAVATLQPLAIYAKANNPGVPDSLALTGNGISGIVMVALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAMSGRAVEAA
GDVNTLLLDKTGTITLGNRQAAAFVPLTGVTPESLADAAQLSSLADETPEGRSIVVFAKREFGLRARTPGELAEAHWIEF
SATTRMSGVNLGEHRLRKGAAAAVVDWVRGEGGTVPVELFDVVDAISHAGGTPLVVGHVITDDTDPKRAEVLGVIHLKDV
VKQGMKQRFDEMRRMGIRTVMITGDNPLTAKAIADEAGVDDFLAEATPEDKLALIKQEQAGGRLVAMTGDGTNDAPALAQ
ADVGVAMNTGTSAAKEAGNMVDLDSDPTKLIEIVEIGKQLLITRGALTTFSISNDIAKYFAIIPALFVGLFPGLDLLNIM
RLHSPQSAILSAVIFNAIVIVALIPLALKGVRYTPSSAAKLLSRNLYIYGLGGIIAPFLGIKLIDLVVQLLPGMS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-173 61
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 2e-173 61
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-156 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-156 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-156 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 2e-156 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-156 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 2e-156 55