Gene Information

Name : MSMEI_4969 (MSMEI_4969)
Accession : YP_006569708.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_018289
Putative virulence/resistance : Unknown
Product : IS629 transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5197213 - 5198124 bp
Length : 912 bp
Strand : -
Note : -

DNA sequence :
GTGATCGTCGACTACATCGACGCTTACCGCCACCGGTTCGGGGTCGACCCGATCTGCGCCGTGCTCTCCGAGCACGACAT
GCCGATCGCCCCGTCCACCTACTACGCGGCCAAGGCTCGCGGTCCGGTCAGCGACGCGGCCTGGGCCGAGGCGCACGCCG
CCAACGCCGTCCATACGGTGTTCTGGGCCAACCGGGGTCTGTATGGGGTCCGCAAGATGTGGCATGCGATGCGACACGCT
GGTCACGACATGGGCCGCGATCAGGTGGCCCGGCTGATGCGCATCTGTGGAATCTCGGGCGCGGTGCGCGGCAAACGCCG
CACCATCACCACCGCCTCCGAGCAGGGTGCACCACGGCACCCGGATTTGATCGAGCGCAAGTGGGGCCTGCCGGTGCGCC
CGGATCAGTGGTGGGTGGCTGATTTCACCTACACCTGGACGCTGGCGGGGTTCGTCTACACGGCGTTCTGTGTCGACGTG
TTCTCCCGACGCATTCTGGGCTGGCGGGTGATGTCGACCAAGGCCACTCCGCTGGTGACCAGTGTGCTCGAGCAGGCGGT
GTTCACTCGTCGTAGGACTGATTTCCGTTTCACTACAACGGGTTTGGTGCACCACTCGGATGCGGGAAGCCAATACACAT
CGCTGGCTTTCACCGACGCACTGCGCGACTCAGGGATCGCCGGCTCGATCGGATCGGTCGGCGACGCGCTCGACAACGCG
TTGATGGAATCGGCGATCGGCCTCTACAAGACCGAGCTGATCGACCGCCACCAATCCTGGACCGGGCGTGCCGAAGTCGA
ACGCGAAACCGCGGCCTGGGTGCACTGGTACAACACCGACCGCCTGCACTCCTCCCTGAGCTACCAGTCGCCGATCGACT
ACGAGGCCCAGTACCGGGCTCTTCGCAGTTGA

Protein sequence :
MIVDYIDAYRHRFGVDPICAVLSEHDMPIAPSTYYAAKARGPVSDAAWAEAHAANAVHTVFWANRGLYGVRKMWHAMRHA
GHDMGRDQVARLMRICGISGAVRGKRRTITTASEQGAPRHPDLIERKWGLPVRPDQWWVADFTYTWTLAGFVYTAFCVDV
FSRRILGWRVMSTKATPLVTSVLEQAVFTRRRTDFRFTTTGLVHHSDAGSQYTSLAFTDALRDSGIAGSIGSVGDALDNA
LMESAIGLYKTELIDRHQSWTGRAEVERETAAWVHWYNTDRLHSSLSYQSPIDYEAQYRALRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 4e-34 47
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 7e-35 47
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-39 46
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-43 43
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 2e-49 43
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-44 42
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-43 42
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-43 42
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-44 42
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 3e-43 42
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-42 42
Z1198 NP_286733.1 transposase Not tested TAI Protein 8e-43 42
Z1638 NP_287141.1 transposase Not tested TAI Protein 8e-43 42
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 8e-41 42
Z1221 NP_286756.1 transposase Not tested TAI Protein 7e-43 42
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-41 42
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 4e-43 42
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-41 42
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-41 42
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 5e-41 42
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 2e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEI_4969 YP_006569708.1 IS629 transposase orfB VFG1602 Protein 1e-42 41