Gene Information

Name : dppD (MSMEI_4256)
Accession : YP_006569007.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_018289
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4446450 - 4448030 bp
Length : 1581 bp
Strand : +
Note : -

DNA sequence :
ATGACGGATCTGAAGACCAACGCCCCGGTACTCAGTGTCCGTGACCTCACGGTCGGTATCGGACGACGCGAGATCGTGCA
TGGGGTGTCGTTCGACGTGCACCGCGAACAGACCGTGGGCATCGTCGGTGAATCCGGATCCGGGAAGTCGCTGACGGTGC
TCGCGGCCACCGGCCTGCTCGACGCGCCAGGTGCGGTGGTCAGGGGCACCAGCACCCTGGCCGACGGCTCCCAACTCGTC
GGCGCATCGGCGCGGTTGCTGCGTTCGGTGCACGGCGGGCGCATCGGGTTCGTGTTCCAGGACCCGGGCACGTCGCTGAA
TCCGCTGCTGACGCTCGAGCGTCAGATCACCGAATCGCTTGAGACGCACCGCAAGATGTCGCGCCGGCAGGCCCGCACTC
GCGCCGGTGAGCTGCTGGAGGCCGTCGGGTTGCCACCTCAGCGACTCGATGCCTACCCGCACCAGTTGTCCGGTGGGCAG
CGGCAGCGCGTCATGATCGCGATCGCGCTCGCGTGCGACCCGGAACTGCTCATCGCCGACGAACCCACCACCGCACTGGA
TGTCACGACGCAGGCCCAGATCGTCGACCTGGTGGCCGATTTGCAGCGCGACTTCGGCGCGGCGGTGGTGTGGATCAGCC
ACGATCTCGGCGTGATCGGACAGGTCGCCGACGAGGTGACGGTGCTGCGCGACGGTGACGCGGTCGAACAGGCCCCCGTT
ATGGACGTGTTCGACCGGCCGCGCCACGAGTACACCAGGGAACTGCTGGCCGCGCGTCCGCGCGTCGACGACGCCGGTCC
CCCGGCGCCGCCCGACGACGCCGGGATCCTGTTGGACGTCGCCGATCTGGAGGTCCGGTACGCCGACGTCGCTGCGGTCA
AGGGCGTGTCGTTCACGATCCGGCGCGGTACCACACTGGGCCTGGTCGGCGAGTCCGGTTCGGGCAAGTCGACCGTGGCG
GCCGCGCTTACCGGTCTGTCCGAACCGTCCGCGGGCACGGCCACACTCGACGGCGCCGACGTGTTCGGCGGTGGAAGCGA
GCTGCGCAGGCGGATCAGCCTGGTGTTCCAGGACCCGTTCAGTTCACTGAACCCGCGGGCGCGAGTCGGCACGACCATCG
GTGAGCCGTTACAGGTGCACGGCCTGGCCAAGGGCAGGCGGGCACGCGCCGAGCGGGTCGCCGAGCTGCTCGAACTGGTC
GGGCTGCCCGGCGATTTCGCGTCCCGGTACCCGCACGAGCTGTCCGGTGGCCAGCGTCAGCGGGTCAGCATCGCGCGGGC
GCTGGCCACCGAACCGGAGCTGCTCATCCTCGACGAATCGACGGCCTCGCTGGACGTGTCGGTGCAGTCCCGCGTGCTGG
ACCTGCTGGCCGATCTGCAACGCGAGCTCGGCCTGGCCTACCTGTTCATCGCGCACGATCTGGCGGTCGTGCATCGCATG
AGCCACGACGTGCTGGTGTTGCGCGACGGTGAGGTGGTCGAATACCGGCCCGCGGCGGAGTTGTTCGCCGCGCCGCAGCA
CGAGTACACCCGCACGCTGCTGGCCGCGGTTCCGCCGCTGCGGCCGCATGAGAAGGTCTAG

Protein sequence :
MTDLKTNAPVLSVRDLTVGIGRREIVHGVSFDVHREQTVGIVGESGSGKSLTVLAATGLLDAPGAVVRGTSTLADGSQLV
GASARLLRSVHGGRIGFVFQDPGTSLNPLLTLERQITESLETHRKMSRRQARTRAGELLEAVGLPPQRLDAYPHQLSGGQ
RQRVMIAIALACDPELLIADEPTTALDVTTQAQIVDLVADLQRDFGAAVVWISHDLGVIGQVADEVTVLRDGDAVEQAPV
MDVFDRPRHEYTRELLAARPRVDDAGPPAPPDDAGILLDVADLEVRYADVAAVKGVSFTIRRGTTLGLVGESGSGKSTVA
AALTGLSEPSAGTATLDGADVFGGGSELRRRISLVFQDPFSSLNPRARVGTTIGEPLQVHGLAKGRRARAERVAELLELV
GLPGDFASRYPHELSGGQRQRVSIARALATEPELLILDESTASLDVSVQSRVLDLLADLQRELGLAYLFIAHDLAVVHRM
SHDVLVLRDGEVVEYRPAAELFAAPQHEYTRTLLAAVPPLRPHEKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-78 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-78 41
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 4e-78 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 4e-78 41
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 4e-87 41