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Name : lysS2 (MSMEI_3707) Accession : YP_006568461.1 Strain : Mycobacterium smegmatis MC2 155 Genome accession: NC_018289 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase 2 Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 3864621 - 3867941 bp Length : 3321 bp Strand : + Note : - DNA sequence : ATGACCGTAATCAGTCGCGTCGAGCACCTCCCGGCGCGTCCGGCCTCCCGAGTGGCCTGGGTGCCCGCGGCAGCGGGCTG GACCGTCGGCGTCATCGCGACCCTCTCGTTGATCGCCAGCGTCTCGCCTCTCGTGCGCTCGCTCATCCGGGTGCCGCGGG AGTTCGTCAACGACTTCATCTTCAACTTCCCGGACACCAGCTTCGCCTGGGCGTTCGTCCTGGCGCTGCTGGCCGCCGCG CTGGCGGCCCGCAAGCGCATCGCGTGGTGGGTCCTGGTGCTCTACCTGGTGGGTGCCATCGGCTGGAACGTGGGCGATCT CGCGGCGGGCGGCGACACCGTCGCCGACGACATCGGCGAGCTCATCGGCATCGCCTTCCACGTCGCGGCGATCGTGTTCC TGGTGGTGGCCCGCAAGGAGTTCTGGGCCAAGGTCCGCCGCGGCGCTCTGCTCAAGTCGGCGGCGGTGCTGGTGGCCGGC AACCTGATCGGCATCGTCGTGGCGTGGGGACTGCTGCAGGCGTTCCCGGGCACCCTTGACCCCGAGTGGCGGTTGCCGTA CGCGGTCAACCGGGTCAGCGGGTTCGCGACCGTGCCCACCGAGGTGTTCGAGGGTTACTCGCACACGTTCCTCAACGCGA TCTTCGGCCTGTTCGGCGCACTGGCTTTGATGGCCGCGGCGATCGTGCTGTTCCAATCGCAGCGCGCGTCGAACGCGCTC ACCGGTGAGGACGAGTCCGCCATCCGGGGGCTGCTCGAGCTCTACGGCAAGAACGACTCCCTCGGCTACTTCGCGACCCG CCGCGACAAGTCGGTGGTGTTCGCGCCGAACGGACGCGCCGCAATCACCTACCGCGTCGAGGTCGGCGTGTGCCTGGCCA GTGGCGACCCCGTCGGTGACCCCAAGTCGTGGCCGCAGGCCATCGCGGCGTGGTTGCAGTTGTGCCAGGCCTACGGCTGG GCACCCGGCGTGATGGGCGCGAGCCTGGCGGGCGCCGAGGCCTACCGGGCCGCGGGTCTCAACGCGCTGCAACTGGGCGA CGAGGCGATCCTGCACCCCGACCGCTTCCGGTTGTCGGGACCCGACATGCGCGCCGTGCGCCAGGCCGTGACCCGCGCGC GCCGGGCAGGCACCTCGGTGCGGATCCGGCGGCACCGCGAACTGTCACCCGAGGAGATGGCCGCGGTGATCCGGCGTGCC GACGCGTGGCGCGACACCGAGACCGAACGCGGCTTCTCGATGGCGCTGGGCCGGCTGGGCGATCCCGCCGACGACGACTG TCTGCTGGTCGAGGCCGTGCAGGGCGATGAGGTGGTGGCGATGCTGTCGCTCGTGCCGTGGGGCAGCAACGGTGTGTCGC TCGACGTCATGCGACGCTCACCGCGGTCGCCCAACGGCACCATCGAGCTGATGGTCAGCGAGCTGTGCATGCAGGCCGAG GACATCGGCATCAGCCGGATCTCATTGAACTTCGCGATGTTCCGCTCGGCGTTCGAGCAGGGCGCGCAGCTGGGTGCCGG GCCGGTCGCGCGGCTGTGGCGGGCCCTGCTGGTGTTCTTCTCCAAATGGTGGCAGCTGGAGAGCCTGTACCGCTCCAACA TGAAGTACCAGCCCGAGTGGGTGCCGCGGTACGCGTGTTACGAGGACGCGCGGCTGGTGCCGCGGGTCGGTGTGGCGTCG GTGATTGCGGAAGGCTTTCTGGTGCTTCCGTTCTCGCGACGCAACAAGCAACACACCGGCGAGCACATCGCCGCACCCGA CACCCTGGTGCAGTCCGGGCGACTGCACCGCGACGGCAGCGCACCCGACGTCACCGGGCTGCAGGGCGAGCTGCCCGACG CCGACGACGAGCCCCGCCTGCCCGAGCAGGTCCGCGTGCGCATGGCCAAACTCAAGGCGTTGCAGGGCAACGGCGTCGAC GCCTACCCCGTGGGGCAACCGCCCAGCCACACCGTCGCTCAGGCCCTTGGCGCCACCGATGGCGAGACGCTGTCGGTGGC CGGCCGTGTGATGCGGATCCGCGACTACGGCGGCGTGCTGTTCGCGCAACTGCGGGACTGGTCGGGTGAGGTCCAATTGC TGTTGGACAACGCCGCACTGACCGAGGGCGAGACCGCGGACTTCACCGCGACGATCGACCTGGGCGACCTCGTCGAGGTG ACCGGTTCGATGGGCTTCAGCCGCAACGGAACCCGCTCGCTGCTGGTCGAGCGCTGGCGACTGATCGGCAAGTGCCTGCG CCCGCTGCCCGACAAGTGGAAGGGCCTCACCGACCAGGAGGCCCGTGTGCGGGCCCGCTATGTCGACCTGGCCGTCAACA CCGAGGCGCGCGATCTGATCCGCGCACGCAGCGGCGCGTTGCACGCCATCCGGGAAACCCTGTACTCCAAGGGTTTCCTC GAGGTCGAGACCCCGATCCTGCAGCAAATCCACGGCGGCGCCAACGCCAGGCCGTTCTTGACCCACATCAACGCCTACGA CCTGGACCTGTATCTGCGGATCGCACCCGAGCTGTACCTCAAGCGGTTGTGCGTGGGCGGTGTCGAGCGGGTCTTCGAAC TGGGCCGCGCGTTCCGCAACGAGGGCGTCGACTTCAGCCACAACCCCGAGTTCACACTCCTGGAGGCCTATCAGGCGCAC GCCGACTACAACGTGTGGATCGACGGCTGCCGCGAGCTGATCCAGAACGCGGCACAGGCCGCCAACGGTGCGCAGGTGTT CCTGCGGCCCCGCCCGAACGATCCGGCCGGGACCCTCGAGCCCGTCGACATCTCCGGGCAGTGGGCCGTCAAGACCGTGC ACGACGCGGTCTCCGAGGCGATCGGCGAGCACATCACGCCCGAGACCGAGCTGGGCGAGCTTCGGCGCCTGTGTGATTCG GCCGGTATTCCCTACCTGACGCACTGGGACGCCGGCGCGGTGGTTCTGGAGATGTACGAGCACCTGGTCGAGGACCGCAC CACCGAACCCACGTTCTACAAGGACTTCCCGACGTCGGTGTCGCCGCTGACCCGGCCGCACCGCAGCATCCCGGGGGTCG CCGAACGCTGGGACCTGGTGGCGTGGGGCGTCGAACTCGGCACGGCCTACAGCGAGCTGACCGATCCGGTCGAGCAGCGC CGCCGCCTGCAGGAGCAGTCCCTGCTTGCGGCCGGTGGTGATCCCGAGGCGATGGAACTCGACGAGGACTTCCTGCAGGC CATGGAGTACGCCATGCCGCCGACCGGCGGCCTGGGCATGGGCGTGGACCGCGTGGTCATGATGATCACCGGGCGCAGCA TCCGTGAGACGCTGCCGTTCCCGCTCGCCAAACCGCGTTAG Protein sequence : MTVISRVEHLPARPASRVAWVPAAAGWTVGVIATLSLIASVSPLVRSLIRVPREFVNDFIFNFPDTSFAWAFVLALLAAA LAARKRIAWWVLVLYLVGAIGWNVGDLAAGGDTVADDIGELIGIAFHVAAIVFLVVARKEFWAKVRRGALLKSAAVLVAG NLIGIVVAWGLLQAFPGTLDPEWRLPYAVNRVSGFATVPTEVFEGYSHTFLNAIFGLFGALALMAAAIVLFQSQRASNAL TGEDESAIRGLLELYGKNDSLGYFATRRDKSVVFAPNGRAAITYRVEVGVCLASGDPVGDPKSWPQAIAAWLQLCQAYGW APGVMGASLAGAEAYRAAGLNALQLGDEAILHPDRFRLSGPDMRAVRQAVTRARRAGTSVRIRRHRELSPEEMAAVIRRA DAWRDTETERGFSMALGRLGDPADDDCLLVEAVQGDEVVAMLSLVPWGSNGVSLDVMRRSPRSPNGTIELMVSELCMQAE DIGISRISLNFAMFRSAFEQGAQLGAGPVARLWRALLVFFSKWWQLESLYRSNMKYQPEWVPRYACYEDARLVPRVGVAS VIAEGFLVLPFSRRNKQHTGEHIAAPDTLVQSGRLHRDGSAPDVTGLQGELPDADDEPRLPEQVRVRMAKLKALQGNGVD AYPVGQPPSHTVAQALGATDGETLSVAGRVMRIRDYGGVLFAQLRDWSGEVQLLLDNAALTEGETADFTATIDLGDLVEV TGSMGFSRNGTRSLLVERWRLIGKCLRPLPDKWKGLTDQEARVRARYVDLAVNTEARDLIRARSGALHAIRETLYSKGFL EVETPILQQIHGGANARPFLTHINAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAH ADYNVWIDGCRELIQNAAQAANGAQVFLRPRPNDPAGTLEPVDISGQWAVKTVHDAVSEAIGEHITPETELGELRRLCDS AGIPYLTHWDAGAVVLEMYEHLVEDRTTEPTFYKDFPTSVSPLTRPHRSIPGVAERWDLVAWGVELGTAYSELTDPVEQR RRLQEQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMMITGRSIRETLPFPLAKPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 3e-160 | 42 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 3e-160 | 42 |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 8e-160 | 42 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 3e-160 | 42 |
