Gene Information

Name : MSMEI_1818 (MSMEI_1818)
Accession : YP_006566585.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_018289
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1937784 - 1938638 bp
Length : 855 bp
Strand : +
Note : -

DNA sequence :
ATGACCCCCACGCCACGGACCGCCAAGAACACCGCCACCGTCACCGAGGAGCCGCCGTCGACGGCGGCCAGCCGCTATCA
GAAGCTGCGTTCACATCTGGCTGAGCTCAAACTGCACGCCGCCGCCGCGGCGCTGCCCGCCGTGCTCGACCAGGCCAGCG
CCGAGAACCTGTCACTGACCGTGGCGTTGGAGCGGCTGCTGGCGGTCGAGGTCGAGGCCAGCACCGCCCGGCGGCTGGCT
GGGCGGCTGCGGTTCGCCTGCCTGCCCACCCCGGCCACCCTCGATGATTTCGACGTCGATGCAGCCGCCGGCATCGACCG
CAAGCTCATCGACGAACTGGGCACCTGCCGTTACCTCGAGTCGGCGACCAACATTCTGCTCGTCGGCCCGCCGGGCACCG
GGAAGACGCACCTGTCGGTGGGGTTGGCAAGGGCGGCAGCGCATGCCGGGTATCGGACCTACTTCACCACTGCCGCCGAT
CTGGCAGCTCGGTGCCATCGCGCGGCGATTGAGGGGCGCTGGGCCACCACCATGCGGTTCTACGCCGGCCCCACCCTGTT
GGTGATCGATGAACTGGGCTATTTGCCGCTGCCTGCCGAGGCCGCCTCGGCGTTGTTTCAGGTTGTCTCCCAACGGTATT
TGAAAACCAGCATCGTGATCACGACCAATCGTGGTGTCGGATCCTGGGGAGAGATCCTCGGCGACACCACCGTGGCCGCC
GCCATGCTCGACCGCCTCCTGCACCGCTCGGTGGTCATCAACCTCGACGGCGAGTCCTACCGCCTTCGCGACCACCAGGC
CGCCGCGGAAACCCTCCGCCGCGCCACCACCGGCACCCGCCAAGCACTACACTGA

Protein sequence :
MTPTPRTAKNTATVTEEPPSTAASRYQKLRSHLAELKLHAAAAALPAVLDQASAENLSLTVALERLLAVEVEASTARRLA
GRLRFACLPTPATLDDFDVDAAAGIDRKLIDELGTCRYLESATNILLVGPPGTGKTHLSVGLARAAAHAGYRTYFTTAAD
LAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGSWGEILGDTTVAA
AMLDRLLHRSVVINLDGESYRLRDHQAAAETLRRATTGTRQALH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 5e-31 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 5e-31 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 5e-31 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 5e-31 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 5e-31 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 7e-31 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 5e-31 42
unnamed CAA21402.1 - Not tested HPI Protein 7e-31 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 7e-31 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-31 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-31 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 5e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEI_1818 YP_006566585.1 hypothetical protein VFG1515 Protein 3e-31 42
MSMEI_1818 YP_006566585.1 hypothetical protein VFG1627 Protein 3e-31 42
MSMEI_1818 YP_006566585.1 hypothetical protein VFG1606 Protein 3e-31 42
MSMEI_1818 YP_006566585.1 hypothetical protein VFG1663 Protein 4e-31 42