Gene Information

Name : MSMEI_1689 (MSMEI_1689)
Accession : YP_006566456.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_018289
Putative virulence/resistance : Unknown
Product : IS629 transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1823122 - 1824051 bp
Length : 930 bp
Strand : +
Note : -

DNA sequence :
GTGATCGTCGACTACATCGACGCTTACCGCCACCGGTTCGGGGTCGACCCGATCTGCGCCGTGCTCTCCGAGCACGACAT
GCCGATCGCCCCGTCCACCTACTACGCGGCCAAGGCTCGCGGTCCGGTCAGCGACGCGGCCTGGGCCGAGGCGCACGCCG
CCAACGCCGTCCATACGGTGTTCTGGGCCAACCGGGGTCTGTATGGGGTCCGCAAGATGTGGCATGCGATGCGACACGCT
GGTCACGACATGGGCCGCGATCAGGTGGCCCGGCTGATGCGCATCTGTGGAATCTCGGGCGCGGTGCGCGGCAAACGCCG
CACCATCACCACCGCCTCCGAGCAGGGTGCACCACGGCACCCGGATTTGATCGAGCGCAAGTGGGGCCTGCCGGTGCGCC
CGGATCAGTGGTGGGTGGCTGATTTCACCTACACCTGGACGCTGGCGGGGTTCGTCTACACGGCGTTCTGTGTCGACGTG
TTCTCCCGACGCATTCTGGGCTGGCGGGTGATGTCGACCAAGGCCACTCCGCTGGTGACCAGTGTGCTCGAGCAGGCGGT
GTTCACTCGTCGTAGGACTGATTTCCGTTTCACTACAACGGGTTTGGTGCACCACTCGGATGCGGGAAGCCAATACACAT
CGCTGGCTTTCACCGACGCACTGCGCGACTCAGGGATCGCCGGCTCGATCGGATCGGTCGGCGACGCGCTCGACAACGCG
TTGATGGAATCGGCGATCGGCCTCTACAAGACCGAGCTGATCGACCGCCACCAATCCTGGACCGGGCGTGCCGAAGTCGA
ACGCGAAACCGCGGCCTGGGTGCACTGGTACAACACCGACCGCCTGCACTCCTCCCTGAGCTACCAGTCGCCGATCGACT
ACGAGGCCCAGTACCGTAATGACGCCGCCTCAACACCGGAGGTGGCCTAA

Protein sequence :
MIVDYIDAYRHRFGVDPICAVLSEHDMPIAPSTYYAAKARGPVSDAAWAEAHAANAVHTVFWANRGLYGVRKMWHAMRHA
GHDMGRDQVARLMRICGISGAVRGKRRTITTASEQGAPRHPDLIERKWGLPVRPDQWWVADFTYTWTLAGFVYTAFCVDV
FSRRILGWRVMSTKATPLVTSVLEQAVFTRRRTDFRFTTTGLVHHSDAGSQYTSLAFTDALRDSGIAGSIGSVGDALDNA
LMESAIGLYKTELIDRHQSWTGRAEVERETAAWVHWYNTDRLHSSLSYQSPIDYEAQYRNDAASTPEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 4e-39 46
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 2e-43 43
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-43 42
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-44 42
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 7e-44 42
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 2e-43 42
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-41 42
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 3e-43 42
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-41 42
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-41 42
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 5e-41 42
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 3e-43 42
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-42 42
Z1198 NP_286733.1 transposase Not tested TAI Protein 7e-43 42
Z1638 NP_287141.1 transposase Not tested TAI Protein 7e-43 42
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 7e-41 42
Z1221 NP_286756.1 transposase Not tested TAI Protein 6e-43 42
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 1e-42 41
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEI_1689 YP_006566456.1 IS629 transposase orfB VFG1602 Protein 6e-43 41