Gene Information

Name : MSMEI_1678 (MSMEI_1678)
Accession : YP_006566445.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_018289
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1815180 - 1816367 bp
Length : 1188 bp
Strand : -
Note : -

DNA sequence :
TTGCCAGAAACAGTTTCGGGACGTTACCTGTCCTCGGATGAACGTGAGAACATCGCGTTGTGGCGCGCCCAGGGCGCCGG
GGTGCGTGAGATCGCCCGGCGGCTCAAGCGTGCACCGTCGACCATCTCACGGGAGTTGCGCCGCAATGCCTCGACCCGCA
CCTATCGACTCGACTATAAGGCCTCCACTGCGCAGTGGCACGCCGAGCGGCGCGCCCGCCGCCCCAAGACCGCCAAGCTC
GTTAGCAACGACCGGCTGCGTCAGTACGTCCAGGACAAACTGTCCGGCGTCGTTCGCGGCGCTGATGGCCAGGTCATCGT
CGGTCCCGCCGCCGCCCCGTGGAAGGGACGCAACAAGCCGCACCGGGGTGATCGGGCCTGGGTGCAGGCATGGAGTCCAG
AACAGATCGCTCGACGGCTCCCGCTGGACTTCCCCGATGATGTGACTATGCGGATCAGCCACGAGGCCATCTATCAAGCG
CTGTACGTCGAATCTCGCGGTGCGCTGAAGCGGGATCTGGTCAGCTGCCTGCGCCGAGGCCGGGCACTGCGGGTACCGCG
GGCACGAACGCGGTCCAAGGCGTGGGCCCATGTCACCCCTGAGACGTTGATCAGCCAACGCCCACCCGAGGTCGATGATC
GCGCTGTTCCCGGACATTGGGAGGGTGATCTCCTGATTGGCTTGCAGCGCAGTGCAATCGGCACGCTGGTCGAGCGCAGC
AGCCGGTTCACCATGCTGGTCCATCTGCCACGTGAAGTTGGTTACGGGATAATTCCGCGGACCAAGAACGGGCCGGCGTT
GGCCGGCTATGGCGCCATCACGATGGCCAACGCTCTGGAACAGACGATCACCACGTTGCCCGCGCAACTGCGTCGGTCGT
TGACCTGGGACCGGGGCAAGGAACTGTCGGCGCACGCCCAGTTCTCGGTCGCCTCCGGAGTCAAGGTGTTCTTCGCTGAT
CCGAAGAGTCCGTGGCAGCGCGGTACCAATGAGAACACCAATGGCCTGTTACGCCAATACTTTCCAAAAGGGACCGACCT
CTCAAGATGGTCGGCCGAGGACGTGGCAGCGATCGCCCATACCCTCAACACCAGGCCGCGGAAAACCCTCGGCTGGCGCA
CTCCCGCGGAAGCCTTCGCCGAACACCTACACTCACTTCATCAAGCCGGTGTTGCGACGATCAGTTGA

Protein sequence :
MPETVSGRYLSSDERENIALWRAQGAGVREIARRLKRAPSTISRELRRNASTRTYRLDYKASTAQWHAERRARRPKTAKL
VSNDRLRQYVQDKLSGVVRGADGQVIVGPAAAPWKGRNKPHRGDRAWVQAWSPEQIARRLPLDFPDDVTMRISHEAIYQA
LYVESRGALKRDLVSCLRRGRALRVPRARTRSKAWAHVTPETLISQRPPEVDDRAVPGHWEGDLLIGLQRSAIGTLVERS
SRFTMLVHLPREVGYGIIPRTKNGPALAGYGAITMANALEQTITTLPAQLRRSLTWDRGKELSAHAQFSVASGVKVFFAD
PKSPWQRGTNENTNGLLRQYFPKGTDLSRWSAEDVAAIAHTLNTRPRKTLGWRTPAEAFAEHLHSLHQAGVATIS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 4e-118 66
DIP0764 NP_939135.1 transposase Not tested Not named Protein 2e-118 66
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 4e-118 66
unnamed CAC39292.1 - Not tested LPA Protein 2e-46 41