Gene Information

Name : MSMEI_0014 (MSMEI_0014)
Accession : YP_006564792.1
Strain : Mycobacterium smegmatis MC2 155
Genome accession: NC_018289
Putative virulence/resistance : Virulence
Product : ABC-type transporter, permease components
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 12825 - 13856 bp
Length : 1032 bp
Strand : +
Note : -

DNA sequence :
GTGATCACGCAGGCACCGCTCGCACCGCCGCGCGCCGCGCGTAACCACCGGGCTGTCGGACTGGCCGTCGCGACAGTCGT
TCTGGTCGCGATGTGCATCGCGAGCCTCGCGATCGGCACGCAGAACGTCTCGTTGTCCACGGTCTGGCAGGCCGTCACCG
ACTACCGCGACATCGGCGACCAGTGGATCGTCCACGACCTGCGGATCCCGCGTACGGTGCTGGGTCTGCTGGTCGGCCTG
GCCCTCGGACTCTCGGGCACCCTGATCCAGGCCGTGGGACGTAACCCGCTCGCCGATTCCGAGATCCTCGGCATCAACTC
GGGTGCGGCGCTGTTCGTCGTCGCGGCCATCGCGTTCCTCGGGTTCAGCGGAATCTGGACGTACATCGGATTCGCTTTTC
TCGGAGCGCTTTTCGCGATGCTCATGGTGTACCTGATCGGCATGACCGGACGGGCCACCGTCACACCGGTCCGCGTGCTG
CTCGCGGGGGTGGCGATCGGTGCCGTGATGGACGGTTTCGGATTCGTCATCAGACTGCAGAATCCGCGGGCGTTCGACAA
CATGCGCTTCTGGGATGCCGGCGCGCTCGACGGGAGACCGCTTGAGGTGGCCGGCGCGATCGCACCGTTCATCGCGGTCG
GCGCCGTGTTGTGCCTCGTGGTGTCGCGCTCGCTGAACATCACCGCGCTTGGCGACGATCTTGCGAAGAGCATGGGCAGC
AACGTCGTTCGTACCCAGGTGCTCAGCCTGACGGCGGTGACGCTCCTGGCCGGTGCGGCGACGGCAGGCGCCGGGCCGAT
CGGCTTCGTCGGCTTGATGGTGCCGCACGCGGTGCGGCGGTTCACCGGCCCGGACTGGCGGTGGGTCCTGGCGTACGCGA
CGGTGGTCGCGCCCAGTCTGATGCTGGCCGCCGACATCGTCGGCCGGGTCGTCATCCGGCCGTCGGAACTGCCCGCGGGC
ATCGTCACCGCGTTTCTCGGCGCCCCCGTACTCATCTGGCTCATCAGGCGTTCGAAGGCGGACCGCGCATGA

Protein sequence :
MITQAPLAPPRAARNHRAVGLAVATVVLVAMCIASLAIGTQNVSLSTVWQAVTDYRDIGDQWIVHDLRIPRTVLGLLVGL
ALGLSGTLIQAVGRNPLADSEILGINSGAALFVVAAIAFLGFSGIWTYIGFAFLGALFAMLMVYLIGMTGRATVTPVRVL
LAGVAIGAVMDGFGFVIRLQNPRAFDNMRFWDAGALDGRPLEVAGAIAPFIAVGAVLCLVVSRSLNITALGDDLAKSMGS
NVVRTQVLSLTAVTLLAGAATAGAGPIGFVGLMVPHAVRRFTGPDWRWVLAYATVVAPSLMLAADIVGRVVIRPSELPAG
IVTAFLGAPVLIWLIRRSKADRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 6e-24 44
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 6e-24 44
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 6e-24 44
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 6e-24 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MSMEI_0014 YP_006564792.1 ABC-type transporter, permease components VFG0926 Protein 6e-37 47