Gene Information

Name : PGA1_65p00400 (PGA1_65p00400)
Accession : YP_006564773.1
Strain :
Genome accession: NC_018288
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 55160 - 55816 bp
Length : 657 bp
Strand : -
Note : -

DNA sequence : 
GTGATCCGGTTTGAAAATCTGACGAAGAGCTTCTGGCTCAAGGGGGAGCGGCGGATTGTCATCGACAATCTGAACCTGAC
GCTGCCGACGGGACGGTCGCTGGCGCTTCTGGGGCGCAATGGCGCGGGCAAATCCACCCTGCTGCAGCTGGTGGCGGGCA
CCATGCGCCCCGATCATGGCGAGATCATCTCCGACGGGTCGATTTCCTGGCCAGTGGGGCTGGCAGCGTCGTTTCACGGC
GATCTGAGCGGCGCGGAAAACGTCCGTTTCATTGCGCGGATTTACGGCGTGGATACCGATGATCTGGTAGGGTTTGTCGA
AGATTTTGCCGAATTGGGCAAATTCTACCATATGCCGATGCGCAGCTATTCTTCCGGCATGCGGGCGCGGCTGACATTCG
GCGCCTCGATGGGGATCAAGTTTGACACCTATCTGGTGGATGAGGTGACGGCGGTGGGCGATGCCGCCTTCAAGCGCAAG
AGCCGCGATATTTTTACCGACCGGATGCGCCATTCCAGCGCCATTCTGGTCAATCATTCGATGCGCCAGCTGCGCCAGTT
CTGCAATGCCGGTCTGGTGCTGGACAATGGTCGGCTGCGCTATTTCAGCGATCTGGATGAGGCCATTGCCGAGCATCATC
GCCTGATGGCGGTCTGA

Protein sequence : 
MIRFENLTKSFWLKGERRIVIDNLNLTLPTGRSLALLGRNGAGKSTLLQLVAGTMRPDHGEIISDGSISWPVGLAASFHG
DLSGAENVRFIARIYGVDTDDLVGFVEDFAELGKFYHMPMRSYSSGMRARLTFGASMGIKFDTYLVDEVTAVGDAAFKRK
SRDIFTDRMRHSSAILVNHSMRQLRQFCNAGLVLDNGRLRYFSDLDEAIAEHHRLMAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 1e-54 52
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 1e-55 51
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 3e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PGA1_65p00400 YP_006564773.1 ABC transporter ATP-binding protein VFG1449 Protein 5e-56 51
PGA1_65p00400 YP_006564773.1 ABC transporter ATP-binding protein VFG0696 Protein 5e-45 43
PGA1_65p00400 YP_006564773.1 ABC transporter ATP-binding protein VFG0258 Protein 1e-45 42