Gene Information

Name : ugpC1 (PGA2_c02330)
Accession : YP_006561498.1
Strain : Phaeobacter gallaeciensis 2.10
Genome accession: NC_018286
Putative virulence/resistance : Resistance
Product : sn-glycerol-3-phosphate import ATP-binding protein UgbC
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.20
Position : 266474 - 267520 bp
Length : 1047 bp
Strand : +
Note : -

DNA sequence :
ATGGCTCAGGTTACCCTGAATTCTGTACGCAAGGTCTACCCTAACGGGGTTGAGGCCGTCACTTCCTCCAGCTTCAAGAT
TGAGGACGGCGAATTCGTCGTTCTGGTCGGCCCGTCGGGCTGCGGCAAATCCACCCTGCTGCGCATGATTGCCGGTCTGG
AGGATATCACCGAAGGCACTCTGGAAATCGGCGACCGGGTGGTGAACAATGTGGATCCCGCAGATCGCGATATCGCGATG
GTGTTCCAGAACTACGCGCTCTATCCGCATATGACGGTGCGCAAGAACATCGCCTATGGTCTGAAAAACCGCAAAACCCC
TGCGGATGAGATCGAGCGCAAGGTGGCCGAGGCCGCCAAGATGCTGAACCTCGAGGAATATCTGGACCGAAAGCCTTCGC
AGTTGTCCGGTGGACAACGCCAGCGGGTTGCCATGGGGCGCGCTATCGTGCGTGACCCGGCATTGTTCCTGTTCGACGAA
CCGCTGTCGAACCTTGATGCCAAGCTGCGTAACCAGATGCGGATTGAGATCAAGGCTCTGCAACGCCGTCTGGGCGTCAC
CTCGATCTATGTGACCCACGATCAGGTCGAAGCGATGACTATGGCGGATCGCATCATCGTGCTGAACGGTGGCCGTATCG
AACAGATCGGCACGCCGTCGGAGATCTACCACAATCCGGCGTCCGTCTTTGTGGCCTCGTTCATGGGCGCACCGCCGATG
AATCTGCTCGACGCCACCATAGCCAACGGCCAGGTGGCATTGCCGGATGGTGTCTCGATGGGCGCGCTGGACACCTCGGC
GCAGGGCGCAGTCAAGCTGGGTATCCGCCCGGAGGACGTCCAACTGGTCGCTGAAGGTGGCCTCGCCATCGATGTGGAAC
TGATCGAAGAACTGGGCGCCCATCGTCTGTTGCATGGCAAACTGGGGGGGCAACCCTTCACCATTCATGTGCTGAAAGAC
ATTCCGGTCGATCCCGGCACCCATCAGATTTCGGTCGATCCTGCGGCGATTTGCCTGTTTGATGCGGAAAGCGGCCAGCG
ACGATGA

Protein sequence :
MAQVTLNSVRKVYPNGVEAVTSSSFKIEDGEFVVLVGPSGCGKSTLLRMIAGLEDITEGTLEIGDRVVNNVDPADRDIAM
VFQNYALYPHMTVRKNIAYGLKNRKTPADEIERKVAEAAKMLNLEEYLDRKPSQLSGGQRQRVAMGRAIVRDPALFLFDE
PLSNLDAKLRNQMRIEIKALQRRLGVTSIYVTHDQVEAMTMADRIIVLNGGRIEQIGTPSEIYHNPASVFVASFMGAPPM
NLLDATIANGQVALPDGVSMGALDTSAQGAVKLGIRPEDVQLVAEGGLAIDVELIEELGAHRLLHGKLGGQPFTIHVLKD
IPVDPGTHQISVDPAAICLFDAESGQRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-35 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugpC1 YP_006561498.1 sn-glycerol-3-phosphate import ATP-binding protein UgbC BAC0604 Protein 2e-43 42