Gene Information

Name : dnaB (MRBBS_0827)
Accession : YP_006557178.1
Strain : Marinobacter sp. BSs20148
Genome accession: NC_018268
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 875019 - 876425 bp
Length : 1407 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAGCCGAATCTTAAGTCCGCAAACAGCGATCCAGAAACCAGTCGAATTAAAGTGCCGCCGCATTCTTTGGAAGC
GGAGCAGGCCGTGCTGGGTGGGCTAATGCTGGACAATCGCCGCTTTGATGAAATCTCCGAGATGATTTCGGCGGTGGATT
TTTATCGCCAAGATCATCGGTTGATTTTTGGCGCGGTGGAACGCCTGGCCAGTGAAAACGAGCCGCTAGACGTTGTTACT
CTGGCCGAATTTCTGGAGCGAGCCGGGGATATCGAGCACGCTGGTGGTCTGTCGTATTTGGCTGAGCTGGCCGAAAAGAC
CCCCGGTGCAGCGAATATCCGCGCCTACGCTGATATTGTTCGTGAACGTTCTATTTTGCGCCAGTTGGTGGAAGCATCGG
GTAAAATTTCCGATTCGGCGTTCAACCCATTGGGTCGCAACAGCAGTGAGATTTTAGACGAAGCCGAACGCACGGTGTTC
CAGATTGCCGAAGCGCGGGTTAAAGAAGGTTCTGGCCCTAAGGGAATTAATCCGATCCTTACGCAAACCCTGAGCCGCAT
TGAAGAGCTGTTCGAATCTGGCGAGCAGACCACCGGCTTGACCACGGGTTTTCGTGATTTGGATGAGCGCACTTCGGGTA
TGCAGCCCTCAGACCTGATTATTGTTGCCGGGCGGCCGTCCATGGGTAAAACCACGCTCGCCATGAACATCGTCGAAAAC
GCCTTGATTTCAAGTGGCCTGCCCGTGTTGGTGTTCAGCATGGAGATGCCAGCGGACGCCTTGGCCATGCGTATGCTGTC
ATCGCTTGGGCGCATTGATCAAACCAAGGTGCGTAATGGCAAGCTTGAAGAAGATGACTGGCCCAGGTTGACCTCGGCGG
TGAGCCTGCTGAAGGACAAACCGCTTTATATTGACGATACCCCCGGCCTAAGCCCAACCGAGCTGCGCTCGCGGGCGCGG
CGCATTGCGCGGGAGAATGGCGGCAAAATCGGGTTGATCATGGTGGATTACCTGCAGCTGATGCGGGTGCCCGGAAACAC
CGAAGGCCGCACCGCGGAAATCTCCGAAATTTCCCGCTCACTCAAGGGCATCGCCAAAGAGCTGAGTTGCCCGGTTGTTG
CACTGTCGCAGCTCAACCGCAGCCTGGAACAACGCCCCAACAAGCGGCCTATTAACTCGGATTTACGTGAATCCGGGGCT
ATCGAGCAAGATGCAGACGTTATTATGTTTGTCTATCGTGATGAGGTTTATAACGAAGATACTCCAGATAAAGGTGTGGC
TGAAATTATCATCGGCAAGCAGCGGAACGGCCCCATTGGTACGATACGCTTGGCGTTTATTGGCAAGTACACCAAGTTTG
AAGATCTTGCCCACGGTAATTATAGCGAGTATGGAGACGACTACTGA

Protein sequence :
MAKPNLKSANSDPETSRIKVPPHSLEAEQAVLGGLMLDNRRFDEISEMISAVDFYRQDHRLIFGAVERLASENEPLDVVT
LAEFLERAGDIEHAGGLSYLAELAEKTPGAANIRAYADIVRERSILRQLVEASGKISDSAFNPLGRNSSEILDEAERTVF
QIAEARVKEGSGPKGINPILTQTLSRIEELFESGEQTTGLTTGFRDLDERTSGMQPSDLIIVAGRPSMGKTTLAMNIVEN
ALISSGLPVLVFSMEMPADALAMRMLSSLGRIDQTKVRNGKLEEDDWPRLTSAVSLLKDKPLYIDDTPGLSPTELRSRAR
RIARENGGKIGLIMVDYLQLMRVPGNTEGRTAEISEISRSLKGIAKELSCPVVALSQLNRSLEQRPNKRPINSDLRESGA
IEQDADVIMFVYRDEVYNEDTPDKGVAEIIIGKQRNGPIGTIRLAFIGKYTKFEDLAHGNYSEYGDDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 4e-107 55
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-100 52
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 3e-100 52
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-98 51
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 8e-95 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 5e-92 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 5e-92 49
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-96 49
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-79 43