Gene Information

Name : lysS (MRBBS_2666)
Accession : YP_006559015.1
Strain : Marinobacter sp. BSs20148
Genome accession: NC_018268
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2830356 - 2831888 bp
Length : 1533 bp
Strand : -
Note : -

DNA sequence :
ATGACCGAACAGATGCACAATGCCCAGCCCGATGACAACAAGCTGATTGCCGAGCGCCGCGCTAAACTGGCGGATATTCG
CGAGCAGGGCAATGCGTTTCCCAACGATTTTCGTCGCGACAGTACCGCTGCCGAACTGCTGGAAAAGTACGCGGACTATA
GCAAGCAGCAGTTGGAAGACATGGCGATTCCGGTGGCCATAGCCGGCCGCATGATGCTGGATCGCAAGGCGTTCAAGGTG
GTTCAGGACGTGACTGGCCGAATTCAGGTGTACGCCACCAAAGATGTGCAAAAGGCGACAAAGCACTGGGATTTAGGAGA
CATTATCGGGGTTCGCGGCATATTGGCGCGCTCGGGCAAGGGTGACCTTTACGTCATCATGGACGATTATCGGCTGCTGA
CAAAATCTCTGCGCCCGCTGCCGGAAAAGCACAAAGGCCTGACCGATACCGAGTCCCGCTATCGCCATCGCTATGTAGAT
TTGATGGTCAACGAAGACAGTCGCCGGGTGTTTTTGGCGCGCTCGAAAATCATTACCGCCATGCGCCAGTTTTTCGCTGA
TCGTGACTTCATGGAAGTTGAGACGCCCATGTTGCAGGTGATCCCCGGCGGCGCCACAGCGCGGCCGTTTATGACACACC
ACAACGCTCTGGGCATTGACATGTACTTGCGCATCGCGCCGGAACTGTATCTAAAACGCCTTGTCGTAGGCGGTTTCGAG
CGGGTGTTTGAAATTAACCGTAATTTCCGCAATGAAGGTCTCTCTACCCGTCACAACCCGGAATTTACCATGGTCGAATT
CTACCAGGCTTACGCCGACTACAACGACCTGATGGATATGACCGAAGACATGCTGCGCAGCATCGCTGAGCAGGTTTTGG
GCTCCAGCCTAGTAGTGAATACGGCGGTTGACGCCGACGGTAATGAAACCCGTATCGAATACGACTTTGGCAAAACGTTT
GATCGGCTGACCGTCGTTGACGCTATTGTGCGTTATAACGAAAACGTCAGCTCCGAACAACTGGCGGACGAAACCTTTGC
GCGGCAGATGGCGAAAGACCTAGGCGTTAAAATAAAAGACAGCTGGGGCCTTGGCAAAGTGCATATCGAGATTTTCGAGG
AAACCGCCGAGCACCGCTTGATGCAGCCCACGTTCATTACCGAATACCCGAAAGAAGTGTCACCGCTGGCCCGCTGCAAA
GACAGTAATCCGTTTGTCACCGAGCGCTTCGAGTTCTTTGTCGGCGGCCGTGAAATTGCCAACGGCTTCTCCGAGTTGAA
TGACGCTGAAGACCAGGCCGAGCGTTTCCGCGCCCAGGTGGCGGAAAAAGACGCCGGCGATGACGAAGCCATGTTCTACG
ATGAAGACTATGTGATGGCGCTGGAATACGGCATGCCGCCCACCGCGGGCGAAGGCATTGGTATCGACCGTCTGGCTATG
CTGCTCACCAACTCCGCGTCTATCCGCGACGTTATCCTGTTTCCGGCCATGCGCCCGGAACATAAAGCGGATAGCAAAAA
GAGCGAAGGCTAA

Protein sequence :
MTEQMHNAQPDDNKLIAERRAKLADIREQGNAFPNDFRRDSTAAELLEKYADYSKQQLEDMAIPVAIAGRMMLDRKAFKV
VQDVTGRIQVYATKDVQKATKHWDLGDIIGVRGILARSGKGDLYVIMDDYRLLTKSLRPLPEKHKGLTDTESRYRHRYVD
LMVNEDSRRVFLARSKIITAMRQFFADRDFMEVETPMLQVIPGGATARPFMTHHNALGIDMYLRIAPELYLKRLVVGGFE
RVFEINRNFRNEGLSTRHNPEFTMVEFYQAYADYNDLMDMTEDMLRSIAEQVLGSSLVVNTAVDADGNETRIEYDFGKTF
DRLTVVDAIVRYNENVSSEQLADETFARQMAKDLGVKIKDSWGLGKVHIEIFEETAEHRLMQPTFITEYPKEVSPLARCK
DSNPFVTERFEFFVGGREIANGFSELNDAEDQAERFRAQVAEKDAGDDEAMFYDEDYVMALEYGMPPTAGEGIGIDRLAM
LLTNSASIRDVILFPAMRPEHKADSKKSEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-135 57
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 1e-84 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_006559015.1 lysyl-tRNA synthetase VFG1668 Protein 1e-135 57