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Name : xcpR (MRBBS_1838) Accession : YP_006558188.1 Strain : Marinobacter sp. BSs20148 Genome accession: NC_018268 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 1949725 - 1951236 bp Length : 1512 bp Strand : + Note : - DNA sequence : GTGAGTTCAGAACCCGAACAACTGCCGAGTAATAATAGAGCCACCAGCAGGCTGCCGTTTTCGTTTGCCAAACGCAACGG CGTAATTGTGACCCGCACAGGCAACGGCGAAACGGTTATTTTGGTGCGCCCTGGCTCTTCCCACATTGCGTTGGCCGAGG CCAACCGCCTATGCGGAGGGCGTGCCCGCTTTGCCACCGTTGAGGCGGATAAGTTCGATCAGGCCTTGAACGATGCTTAC CAGAACGACTCTACCGCTGCCATGCAAATGGTCGAGGGTATTGGTGACGATATGGACCTGGCGTCGTTGGCGGATTCGGT GCCAGAAACCGAAGACCTGCTGGAGCAAGAAGACGACGCCCCTATTATACGCCTGATTAACGCGATACTGACTGAAGCGT TGAAAACCGGCGCGTCGGACATTCATATTGAAACTTATGAAACACGATTGATTATACGTTTCCGGGTAGACGGCGTTCTG CGCGAGATTGTGCAGCCCAAGCGGGCGCTGGCGCCTTTGTTGGTGTCACGAATCAAGGTTATGGCCAAACTCGATATTGC CGAAAAGCGCATTCCTCAGGATGGCCGCATTGCTCTGCGGGTTGCTGGTAGGGAAGTGGATATTCGCGTGTCGACCATGC CTTCGTCGGTCGGTGAAAGGGTGGTGCTTCGATTGCTCGATAAGCAAGCTGGCGCTATACGCCTGGAATCTCTGGGCATG GGCGGTTACGACCTGGAAAAAGTGCGCAAGTTAATCTATCGACCCTACGGAATTTTGCTGGTAACAGGCCCAACCGGCTC CGGTAAATCCACCACTTTGTACGCGGCGTTGCAGGAAATAAATGACCGCAGCCGCAATATTCTGACGGTGGAAGATCCCA TTGAGTACAACCTGCCGGGGATTGGCCAGACCCAGGTTAATACCAAAGCGGATATGACCTTCGCCCGCGGCCTGCGTGCA ATTCTGCGGCAAGACCCTGACGTAGTGATGATTGGTGAAGTGAGAGACCTTGAAACGGCGGAAATTGCGGTTCAGGCGAG TTTGACTGGCCACCTGGTGTTGTCCACCTTGCACACCAACTCTGCGGTGGGTGCGATAACGCGATTGATGGACATGGGCA TCGAACCTTTTCTAATTTCATCGGGTATTGTGGGCATTGTGGCCCAGCGCTTGGTGCGACTGTTGTGCCCCTATTGTCGT GAAGCTTATGAGCCCACGCCGGAACAGTGTGAGTTTCTGCAGCAGGACCCAGCCAATCCGCCGCGAATATTTCGCGCCAG AGGCTGCGCACATTGTCACGATTTGGGCTATCGCGGCCGTATCGGTATTTACGAAACGGTGGAGATCAGCGAAAGCCTCA GTGCGCTGATTCATAAACGCGCCGGCGAACTGGCCTTGGAACGGGAAGCCCGTTTAAACAGTCCCAGCATTCACGCCGAC GGCGTAGCCAAGATTTTGGCGGGCATCACCAGCGTGGAAGAAGTACTTCGCGTTACCCACCGGAACCAATAA Protein sequence : MSSEPEQLPSNNRATSRLPFSFAKRNGVIVTRTGNGETVILVRPGSSHIALAEANRLCGGRARFATVEADKFDQALNDAY QNDSTAAMQMVEGIGDDMDLASLADSVPETEDLLEQEDDAPIIRLINAILTEALKTGASDIHIETYETRLIIRFRVDGVL REIVQPKRALAPLLVSRIKVMAKLDIAEKRIPQDGRIALRVAGREVDIRVSTMPSSVGERVVLRLLDKQAGAIRLESLGM GGYDLEKVRKLIYRPYGILLVTGPTGSGKSTTLYAALQEINDRSRNILTVEDPIEYNLPGIGQTQVNTKADMTFARGLRA ILRQDPDVVMIGEVRDLETAEIAVQASLTGHLVLSTLHTNSAVGAITRLMDMGIEPFLISSGIVGIVAQRLVRLLCPYCR EAYEPTPEQCEFLQQDPANPPRIFRARGCAHCHDLGYRGRIGIYETVEISESLSALIHKRAGELALEREARLNSPSIHAD GVAKILAGITSVEEVLRVTHRNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-135 | 59 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-135 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpR | YP_006558188.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-153 | 66 |
| xcpR | YP_006558188.1 | general secretion pathway protein E | VFG2048 | Protein | 9e-136 | 59 |
| xcpR | YP_006558188.1 | general secretion pathway protein E | VFG1876 | Protein | 6e-136 | 57 |
| xcpR | YP_006558188.1 | general secretion pathway protein E | VFG2426 | Protein | 9e-77 | 47 |
| xcpR | YP_006558188.1 | general secretion pathway protein E | VFG1880 | Protein | 2e-81 | 44 |
| xcpR | YP_006558188.1 | general secretion pathway protein E | VFG0112 | Protein | 5e-84 | 43 |
