Gene Information

Name : AMES_0878 (AMES_0878)
Accession : YP_006547359.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_018266
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 949189 - 950622 bp
Length : 1434 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGTTTTCGAGTACGCACCGGCGCCGGAATCGCGCGCCATCGCGAACCTGAAGGACGCCTACAAGCCGTTCGTCAA
CGGCGAGTTCGTCGACGGCTCGGGTGAGCCGCTGAAGACGATCAACCCGGCCACCGAGGAGGTCCTGGCCGAGGTCGGCA
CCGCGTCGAAGTCCGATGTGGACATCGCGGTCAAGGCCGCGCGCAAGGCTTTCACGGGTGTCTGGTCGAAGATGCCGGGC
ACCGAGCGCGCGAAGTACCTCTTCCGGATCGCGCGGCTGATCCAGGAGCGTTCGCGCGAGCTGGCCGTGCTGGAGAGCCT
CGACAACGGCAAGCCGATCAAGGAGTCGCGCGACTCCGACGTCCCGACGGCGGCCGCGCACTTCTTCTACCACGCGGGCT
GGGCCGACAAGCTCGACTACGCGGGCTACGGCCCTTCGCCGCGCCCCCTGGGTGTCGCGGGCCAGATCATCCCGTGGAAC
TTCCCGCTGCTGATGCTGGCCTGGAAGATCGCCCCGGCGCTGGCCACCGGCAACACCGTGGTGCTGAAGCCCGCCGAGAC
GACACCGCTGACCGCGCTGGTGTTCGCCGAGATCTGCCAGCAGGCCGAGCTGCCGCCGGGCGTGGTGAACATCCTCCCGG
GCGCGGGCGACATCGGCGCGTCCATCGTGGAGCACGGGGACATCGACAAGATCGCCTTCACCGGCTCGACCGAGGTCGGC
AAGGCGATCCAGCGCCAGGTCGCGGGCACGCCGAAGAAGCTGACGCTGGAACTGGGCGGCAAGGCGGCGAACATCGTCTT
CGAGGACGCGCCGCTCGACCAGGCCGTCGAAGGCATCGTCAACGGCATCTTCTTCAACCAGGGGCACGTCTGCTGCGCGG
GCTCGCGCCTGCTGGTGCAGGAGTCCATCGCCGAAGAGGTGCTGGAGAAGCTGCGCTACCGCGTCTCGACGTTGCGCATC
GGCGACCCGCTGGACAAGAACACCGACATCGGCGCGATCAACTCCGCCGAGCAGCTGGCCAAGATCCGCGGGCTCGTCGA
AGCCGGGGACGCCGAGGGCGCGCAGCGCTGGACCAGCCCGTGCCCGGTCCCGGACCGCGGGTTCTTCTTCGCCCCGACGG
TGTTCGCGAACGTCCACCAGTCGATGCGGATCGCCCGCGAGGAGATCTTCGGCCCGGTGCTGTCGGTGCTGACGTTCCGC
ACGCCGGACGAGGCCGTCGCGAAGGCGAACAACACACCGTACGGGCTTTCGGCGGGCATCTGGACCGAAAAGGGCTCCCG
GATCCTGTGGATGGCGAACCAGCTGCGCGCCGGCGTGGTCTGGGCCAACACCTTCAACCGCTTCGACCCCACCGCCCCCT
TCGGCGGCTACCAGGAATCCGGCTTCGGGCGCGAAGGCGGCCGCACCGGGCTGGAGGCGTACCTGAATGTCTGA

Protein sequence :
MPVFEYAPAPESRAIANLKDAYKPFVNGEFVDGSGEPLKTINPATEEVLAEVGTASKSDVDIAVKAARKAFTGVWSKMPG
TERAKYLFRIARLIQERSRELAVLESLDNGKPIKESRDSDVPTAAAHFFYHAGWADKLDYAGYGPSPRPLGVAGQIIPWN
FPLLMLAWKIAPALATGNTVVLKPAETTPLTALVFAEICQQAELPPGVVNILPGAGDIGASIVEHGDIDKIAFTGSTEVG
KAIQRQVAGTPKKLTLELGGKAANIVFEDAPLDQAVEGIVNGIFFNQGHVCCAGSRLLVQESIAEEVLEKLRYRVSTLRI
GDPLDKNTDIGAINSAEQLAKIRGLVEAGDAEGAQRWTSPCPVPDRGFFFAPTVFANVHQSMRIAREEIFGPVLSVLTFR
TPDEAVAKANNTPYGLSAGIWTEKGSRILWMANQLRAGVVWANTFNRFDPTAPFGGYQESGFGREGGRTGLEAYLNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 9e-50 43
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 7e-50 43
aldA ACK75580.1 aldehyde dehydrogenase Not tested VPI Protein 1e-49 43
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 9e-50 43
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 3e-49 43
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 3e-49 43
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 9e-50 43
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 9e-50 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-71 43
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 1e-49 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-74 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-74 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-74 42
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 3e-65 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-73 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMES_0878 YP_006547359.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 2e-71 43