Gene Information

Name : AMES_8504 (AMES_8504)
Accession : YP_006554981.1
Strain : Amycolatopsis mediterranei S699
Genome accession: NC_018266
Putative virulence/resistance : Virulence
Product : two-component system response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 9479067 - 9479747 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :
GTGCGCCTGCTGATCGTGGAGGACGAGCGCGAGTTCGCGGAGACGCTGCGGCGGGGGCTGGTCGCCGAGGGCTTCACCGC
CGATGTCGCGCACACCGGCCGGGAAGGCCTCTGGCGGGCGACCGAGCACGCGTACGACGTCGTGGTGCTCGACATCATGC
TGCCCGAGCTGTCCGGTTACGAGGTGCTCAAACGCCTGCGGGCGGCGGAGAACTGGACGCCGGTGCTGATGCTGACGGCC
AAGGACGGCGAATACGACGAAGCCGACGCGTTCGACCTCGGCGCCGACGACTACCTGTCCAAGCCGTTCTCCTTCGTCGT
GCTCATCGCCCGGCTGCGCGCGTTGCTGCGGCGGGGCGCCCCGGCCCGGCCGGCCGTGCTGGAGGCGGGCGACCTGCGGC
TCGACCCGTCCGCCCGTACCGTCCACCGAGGACAGAAGCGGATCGAGCTCACCGCGCGGGAGTTCGGGTTGCTGGAGTTC
CTGCTGCGGCGGACCGGCGCGGCGCTGTCGAAGAACGAGATTCTGAGCCACGTCTGGGACGCGCACTACGACGGCGACGA
GAACGTCGTCGAGGTGTACATCGGCTACCTGCGGCGCAAGATCGATGCGCCGTTCGGCACCCACACCATCGAGACGGTCC
GGGGTGTGGGCTACCGGCTGGTAGACGTTACTCGATCGTAA

Protein sequence :
MRLLIVEDEREFAETLRRGLVAEGFTADVAHTGREGLWRATEHAYDVVVLDIMLPELSGYEVLKRLRAAENWTPVLMLTA
KDGEYDEADAFDLGADDYLSKPFSFVVLIARLRALLRRGAPARPAVLEAGDLRLDPSARTVHRGQKRIELTAREFGLLEF
LLRRTGAALSKNEILSHVWDAHYDGDENVVEVYIGYLRRKIDAPFGTHTIETVRGVGYRLVDVTRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-28 44
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMES_8504 YP_006554981.1 two-component system response regulator BAC0125 Protein 2e-34 50
AMES_8504 YP_006554981.1 two-component system response regulator BAC0083 Protein 3e-31 48
AMES_8504 YP_006554981.1 two-component system response regulator BAC0308 Protein 4e-31 48
AMES_8504 YP_006554981.1 two-component system response regulator BAC0197 Protein 3e-28 48
AMES_8504 YP_006554981.1 two-component system response regulator BAC0111 Protein 7e-31 46
AMES_8504 YP_006554981.1 two-component system response regulator U82965.2.orf14.gene. Protein 4e-23 46
AMES_8504 YP_006554981.1 two-component system response regulator Y16952.3.orf35.gene. Protein 9e-22 45
AMES_8504 YP_006554981.1 two-component system response regulator BAC0638 Protein 2e-30 45
AMES_8504 YP_006554981.1 two-component system response regulator BAC0347 Protein 1e-24 42
AMES_8504 YP_006554981.1 two-component system response regulator HE999704.1.gene1528. Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AMES_8504 YP_006554981.1 two-component system response regulator VFG1390 Protein 3e-33 45
AMES_8504 YP_006554981.1 two-component system response regulator VFG0596 Protein 9e-29 44
AMES_8504 YP_006554981.1 two-component system response regulator VFG1389 Protein 8e-24 42
AMES_8504 YP_006554981.1 two-component system response regulator VFG1386 Protein 1e-26 41