Gene Information

Name : NJ7G_3708 (NJ7G_3708)
Accession : YP_006543000.1
Strain : Natrinema sp. J7-2
Genome accession: NC_018224
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3210714 - 3212120 bp
Length : 1407 bp
Strand : +
Note : -

DNA sequence :
ATGACCACGATACTCAGCGACACGGAGACGCGAGCCGACGATCGGGAGAGCGACCAGGACACACGACAATCGAGCCCCGA
CGGCGGCGGCACCGCCCTCGAGCACTCGAGCGCACAGTCGACGAATGCAGCGACGATCTGCGTCGTCGGATTGGGATACG
TCGGGCTCCCGCTCGCAGTCGGGTTCGCCCGGTCGAACTACCGCGTCATCGGCTACGACGTCGACGACGTGACGGTGAGT
CGACTGCAGGAGGGGATCGACACGACCGGTGACCTCTCCGACGACGCGATCCAGGACGGCGACATCTCGTATACGACCGA
CGCGACCGAGATCGGCGCGGCGGACTACGTCATCATCGCCGTTCCCACGCCGATCGACGACGACGATCGGCCGGACCTCG
GCTACGTCGAGAGCGCGGCAACCACCGTCGGATCGAAGATGGGCCCGGGTACGACGGTCGTCCTCGAGTCGACGGTCTAC
CCGGGCACGACGCGCGAAACACTCGTCCCGGCGCTCGAGGACGCGTCCGGACTGACCGCGGGCACGGACTTCTTCGTCGG
GTACTCCCCGGAACGCGCCACGCCGGGCGACGCCGACCACGGCCTCGAAGACGTCGTCAAAGTCGTCAGCGCGCAGACCG
AGACGGTGCTCGAGGACGTGGCGACGTTGTACGAGTCGATCGTCGACGCGGGCGTCCATCGCGCGCCGTCGATCGAGGTC
GCCGAGGCCTGCAAGGTCGTCGAGAACGCCCAGCGGGACCTCAACATCGCGTTCGTCAACGAACTCACGATGGCGCTCGA
CACCATGGACATCGACGGCCGGGCCGTCCTCGAGGCCGCGGGCACGAAGTGGAACTTCCACGAGTACCGGCCGGGGCTGG
TCGGCGGCCACTGCATTCCGGTCGATCCGTACTTCTTCGCGTACCGGTCGGCCCAGGAGGGGTTCGACCCGGAACTCATG
CAAACGGGCCGGCGGGTCAACGAGTCGGTCCCCGACCACGTCGCCGAGCTGACGATCAAGGCGCTCAACCAGTGTCACAA
GACGCTCCGCGAGAGTCGCGTCCTGGTGTTGGGGCTGGCGTACAAACCGGACGTCGGCGACATTCGAAGCTCGAAGATCG
GCACCGTCATCGACGAACTGCAGGAGTACGACATCGACGTTGCGGGGTTCGACCCGTTTGCGGACGACGAGGCGGCCCGA
GAGTCGTTCGGCATCGAGATCCAGGATCGACTCTCGTTCGAGGGGTTCGACGCCGTCGTGCTCGCGACGCCCCACGAGGA
GTTCGACCACCTCGATCTCGCGGCGGTCGCGGACGACCTCGCCGACGAGCCCGCACTGATCGACGTGACCGGCGCGATCG
ACGACGGCACCGCCGCCGATGCGGGACTCGTCTACCGGAGGTTGTAA

Protein sequence :
MTTILSDTETRADDRESDQDTRQSSPDGGGTALEHSSAQSTNAATICVVGLGYVGLPLAVGFARSNYRVIGYDVDDVTVS
RLQEGIDTTGDLSDDAIQDGDISYTTDATEIGAADYVIIAVPTPIDDDDRPDLGYVESAATTVGSKMGPGTTVVLESTVY
PGTTRETLVPALEDASGLTAGTDFFVGYSPERATPGDADHGLEDVVKVVSAQTETVLEDVATLYESIVDAGVHRAPSIEV
AEACKVVENAQRDLNIAFVNELTMALDTMDIDGRAVLEAAGTKWNFHEYRPGLVGGHCIPVDPYFFAYRSAQEGFDPELM
QTGRRVNESVPDHVAELTIKALNQCHKTLRESRVLVLGLAYKPDVGDIRSSKIGTVIDELQEYDIDVAGFDPFADDEAAR
ESFGIEIQDRLSFEGFDAVVLATPHEEFDHLDLAAVADDLADEPALIDVTGAIDDGTAADAGLVYRRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-86 48
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 6e-76 43
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 6e-76 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NJ7G_3708 YP_006543000.1 nucleotide sugar dehydrogenase VFG0431 Protein 2e-76 43