Gene Information

Name : EFD32_pB0060 (EFD32_pB0060)
Accession : YP_006539321.1
Strain :
Genome accession: NC_018223
Putative virulence/resistance : Unknown
Product : C-5 cytosine-specific DNA methylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 49415 - 50686 bp
Length : 1272 bp
Strand : +
Note : -

DNA sequence :
ATGACAAAGCAACAATTAACTTTTTTAGATTTATTTTCAGGAGTTGGAGGTTTTCGATTAGGGTTAGAAAAAGCAGGACA
TCGGTGTATAGGTTTTTGTGAAATTGATGCCAAAGCAAGAGAAAGTTACAAAGCAATTCATAATACAGAAAATGAGGTAG
AAATGCATGACATTACAACAATATCAGATGAATTTGTTCGAGGAATCGGACGTGTGGACATTATCGCAGGAGGATTTCCA
TGCCAAGCTTTCAGTGTTGCAGGAAAAAGAAAAGGTTTCAGAGATACTCGAGGAACTCTCTTTTTTGAAATTGCACGGTT
CGCACATATTTTGCAGCCCAAGTATCTATTCCTTGAAAATGTTAAAGGACTCCTCAACCATGATTCAGGCGCTACGTTTG
AGACAATCTTACGAACTTTGGATGAATTGGGGTATAACGTGGAATGGCAAGTGCTTAACAGCAAGAATTATGTCCCACAA
AATAGAGAACGTGTCTTTATTATCGGACGTCTTAGAGGAGCAAGTACCAACCAAATATTTCCTATCACAGGAGAAGAAAG
CCAAATTATTTTTAAATCAGCAAAAATAAATTCAAAAGGAAGAAAACAACAAGTTGTTGGTAATGTGAATCCAAGTGCTA
GAGGAATGAACGGGAATGTATTTTCCTCGGATGCTATAAGTCCGACAATTACTTGCAATAATGGCGAAGGAAGTAAAATA
ATGGTTCCTGCTCAATCAAAAACAACGCATGTGGAAAAAAGAATTATTGTTGAAGGATTGTTAGACAATAAGTTTCGCTC
TTCCTCAGCGGTTGTTTCAGTTAACGGGCTTTCTCCTACTCTTACAACGATGGGTGGCGGTGGCCAAGAACCTAAAATTT
TGGTTCGAGAAGCAACAAAAGAAGGTTATAGTGAAGCTGGACCAGGTGATAGCATTAATTTTGCTTTTCCAAATTCAAAG
AAAAGAAGAGGCCGCGTAGGTAAAAAATATGCACATACGTTGTTAACAGGTGATCAGCAAGCAGTAGTTACTGAAGATTT
CCAGATAAGAAGACTTACTCCAATGGAATGTTGGCGACTACAAGCTTTTCCAGATGAAGCATTTTTAGCAGCAAAATTTG
GAAGTAGGGAGATAGCAAAAATTATTATTGAGAATAAGTTAGATCATTATCATTGTGAGTATGAGCAAAAAATGTCTGAT
AGTAGTTTGTATAAACAAGCGGGGAATTCAGTTACAGTGGCAGTGATATATGATATTGCTAAAAGGTTCTAA

Protein sequence :
MTKQQLTFLDLFSGVGGFRLGLEKAGHRCIGFCEIDAKARESYKAIHNTENEVEMHDITTISDEFVRGIGRVDIIAGGFP
CQAFSVAGKRKGFRDTRGTLFFEIARFAHILQPKYLFLENVKGLLNHDSGATFETILRTLDELGYNVEWQVLNSKNYVPQ
NRERVFIIGRLRGASTNQIFPITGEESQIIFKSAKINSKGRKQQVVGNVNPSARGMNGNVFSSDAISPTITCNNGEGSKI
MVPAQSKTTHVEKRIIVEGLLDNKFRSSSAVVSVNGLSPTLTTMGGGGQEPKILVREATKEGYSEAGPGDSINFAFPNSK
KRRGRVGKKYAHTLLTGDQQAVVTEDFQIRRLTPMECWRLQAFPDEAFLAAKFGSREIAKIIIENKLDHYHCEYEQKMSD
SSLYKQAGNSVTVAVIYDIAKRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0979 YP_001198345.1 C-5 cytosine-specific DNA methylase Not tested 89K Protein 2e-85 49
SSU98_0993 YP_001200551.1 C-5 cytosine-specific DNA methylase Not tested 89K Protein 2e-85 49
Spaf_1137 YP_006309939.1 putative DNA methylase Not tested FWisland_1 Protein 1e-85 49