Gene Information

Name : T1E_0974 (T1E_0974)
Accession : YP_006531623.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1095053 - 1096021 bp
Length : 969 bp
Strand : +
Note : -

DNA sequence : 
ATGCACGACCCTTCCGCCCACCGCAAGCCGCGTATCGCCATCAGCGCCTGCCTGACCGGGCACAGCGTGCGCTACAACGG
CGGCCACAAGGCCTCCGACCTGTGCCGTAAACAACTGGAACAGCACTTCGACTGGCTACCTGTGTGTCCGGAAGTGGCAA
TCGGCCTGGGTGTTCCGCGCGACCCGATTCGCCTGGTCGGCAACCCCGAGCAACCCGAAGTGGTCGGCACCCGCGACCCC
GGCAAGGACCTGACCGACCCGCTGCGCACCTATGGCGAGCAGATGGCCAACGAACTTGACGACATCTGCGGCTACATCTT
CATGCAGAAGTCACCTTCTTGCGGCCTGGAACGGGTAAAGGTTTATCAGGACAATGGCCACCCGGCCGTGCATGGCGGGC
GCGGCGTCTATGCCCAGGCTTTCTGTGCATTGCGCCCGGACCTGCCAGTAGAGGAAGAAGGCCGCCTGCATGACCCCGTG
CTGCGCGAGAACTTCATAAGCCGCGTTTACGCCTACGCCGACTGGCAGCGCCTGCTGGCCGAGGGCCTGAACCGTGGCGC
GCTGGTACGCTTTCATTCGCGCTACAAGTATTTGCTGATGGCCAATAACCCCCAGGCCTATCGCACCCTCGGCCGCCTGC
TTGGCAGCATGAGCAAGGCTGATGAACCACAGAGCATCGGCCCGCGCTATTTCAGCCAGCTGATGCAAGCCCTGCGCCGC
TGCGCGAGCCGCGGCACCCACAGTAACGTGCTGCAGCACCTGAGCGGTTACTTCAAGGATGCCCTGACGCAGCAGGACAA
GGCCGAGTTGCAGGCAGTCATCGGCCAATACCAACAAGGCGTGGTACCACTGGTAGTGCCAATGACCTTGCTCAAACACC
ATTTGCGCAAGCACCCAGACCCCTACCTGCAGCAACAAGCCTACCTGCAGCCGCACCCCGAGAGCCTGGGTTTGCGCAAT
GCGGTCTGA

Protein sequence : 
MHDPSAHRKPRIAISACLTGHSVRYNGGHKASDLCRKQLEQHFDWLPVCPEVAIGLGVPRDPIRLVGNPEQPEVVGTRDP
GKDLTDPLRTYGEQMANELDDICGYIFMQKSPSCGLERVKVYQDNGHPAVHGGRGVYAQAFCALRPDLPVEEEGRLHDPV
LRENFISRVYAYADWQRLLAEGLNRGALVRFHSRYKYLLMANNPQAYRTLGRLLGSMSKADEPQSIGPRYFSQLMQALRR
CASRGTHSNVLQHLSGYFKDALTQQDKAELQAVIGQYQQGVVPLVVPMTLLKHHLRKHPDPYLQQQAYLQPHPESLGLRN
AV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 6e-65 43
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 8e-65 43
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-64 43
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-64 43
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-64 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_0974 YP_006531623.1 hypothetical protein VFG0490 Protein 4e-65 43