Gene Information

Name : T1E_0680 (T1E_0680)
Accession : YP_006531329.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : transcriptional regulator-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 772830 - 773705 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence : 
ATGAAACGCAAGCAATCCATCGAGCAGGTACGCTGGGACCTGGCACTTCGCTATCGTTTGATCGAGACCGTTGCCTGGTG
GGAAGGCCGGCTGACCACGGGGCACCTGATGCAGAGCTTTGGCATCAGCCGCCAGCAGGCGTCGAAGGACATCAATACCT
ACATCACCGAGCATGCGCCCGAAAACTTGACGTATGACAAGCAGATCAAGGGCTATGTACCGAGCGAGCAGTTCGAGCCA
CGGTTCATCGACAACAGCGCCAGCGCCTATCTGCACCTGCTGTACCAGAACAATGAGCGTGCCCCTCACATAGACGGGCT
GGCACTGGCCTATGCACACACCCGGGTGCTGGAAGTACCCGATCGCCCTATTCGGCCAGAGGTGCTGCGCCCCTTGCTCA
AGGCCTGCCGTGAAGGCCTGCGCCTGGAAACCGAATACGTGTCCTTCAACACCCCCAACGTCGAGGTACGCCTGATCGCC
CCGCACACGCTGGTGTACACCGGCATGCGCTGGCACGTGCGGGCTTATTGCGAAAAGAACGGCCAGTACCGCGACTTCGT
GCTGAGCCGCTTACGCGGGCAGCCGGACTTGCTCGACGCATCGCCGAACACGCGTGAGCAGGATGAAGACTGGAATGTGG
AAGTGCCCGTCATCTTCGAACCTGATGGGCGGTTGAACGCGGCGCAGAAGGCAATCATCGAAACCGACTTCGGCATGACG
GATGGGCAATTGGTGGTACCCAGCCGCAGGGCGTTGGTGAAGTATGTGTTGCAGCGGTATCAGATCGACCACCGCAACAT
GGCGATACTGCCCGAGGCCCAGCAACTGGTGGTGAGCAACCTCAAGGAATTGAAACAGTGGTTGATGAATGACTAA

Protein sequence : 
MKRKQSIEQVRWDLALRYRLIETVAWWEGRLTTGHLMQSFGISRQQASKDINTYITEHAPENLTYDKQIKGYVPSEQFEP
RFIDNSASAYLHLLYQNNERAPHIDGLALAYAHTRVLEVPDRPIRPEVLRPLLKACREGLRLETEYVSFNTPNVEVRLIA
PHTLVYTGMRWHVRAYCEKNGQYRDFVLSRLRGQPDLLDASPNTREQDEDWNVEVPVIFEPDGRLNAAQKAIIETDFGMT
DGQLVVPSRRALVKYVLQRYQIDHRNMAILPEAQQLVVSNLKELKQWLMND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1772 NP_231407.1 hypothetical protein Not tested VPI-2 Protein 1e-67 48
VC0395_A1370 YP_001217313.1 hypothetical protein Not tested VPI-2 Protein 1e-67 48
VPI2_0020 ACA01837.1 hypothetical protein Not tested VPI-2 Protein 1e-66 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_0680 YP_006531329.1 transcriptional regulator-like protein VFG1105 Protein 5e-68 48