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Name : T1E_5542 (T1E_5542) Accession : YP_006536157.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : Succinate-semialdehyde dehydrogenase [NADP+] Function : - COG functional category : - COG ID : - EC number : - Position : 6045727 - 6047175 bp Length : 1449 bp Strand : + Note : - DNA sequence : GTGAATTTGAATAATCCCCAACTGTTGCGTCAACTTGCCTATATCGATGGGGAGTGGCTGGCTGCTGATAATCAGGCCAC TATCGACGTGCTCAACCCTTCGACCGGTGCACTCATCGGTCAGGTCCCGCGTATGGGCAAGGCCGAGACACGACGCGCCA TCGAATCCGCCGAACGTGCGCTCCCCGCCTGGCGTGAGCGCTCCGCCAAGGATCGCGCCAACGCGTTACGGCGATGGTAC GACCTGATCATCGCGAACCAGCACGATCTTGCCCAGATCATGACCTTGGAGCAGGGCAAACCGCTGGGTGAAGCGCTAGG TGAAATTACCTTCGGCGCGTCGTACATCGAGTGGTACGCGGAGGAAGCCAAGCGGGTTTACGGCGATGTGATTCCAGGGG CCGCCGATAAGCGACTGTTGGTTCTCAAACAACCGGTCGGTGTATGCGCCGCCATCACACCGTGGAATTTCCCTAGCGCG ATGATCACCCGCAAAGCCGGGCCGGCGCTGGCAGCTGGCTGCACCATGGTCATCAAACCCGCTTCGCAGACACCGTTCTC GGCCCTGGCCTTGGTCTATCTGGCCGAGCAGGCCGGAATACCTCCGGGTGTGTTGTCCGTGGTGCCGGGGGCAGCCGCTG AGATCGCCGAGGAACTCACCAGCAACCCGATAGTGCGCAAGATTTCGTTCACAGGTTCGACCGAGATCGGCCGGGAAATC ATGGAAAAGTGTGCCCAGGACATCAAGAAAATCTCCTTGGAATTAGGGGGTAATGCACCCTTCATCGTGTTCGATGATGC TGATCTCGACGCGGCGGTAGAGGGCGCGCTGGCATCGAAATTCCGTAACGCTGGGCAGACCTGCGTCTGTGCCAACCGCC TGTACGTGCACGACAAGGTGTATGACGCTTTCGTCGACAAGCTGGCTGCAGCGGTCGGAGCGTTGAAGGTCGGCGATGGT TTTGCCGACGGAGTGACCCTTGGGCCGTTGATCGATGGCAAGGCGGTCGCCAAGGTTCATGAGCACATCGAAGATGCCCT GGCCAAAGGCGCCAAGGTCGTCAAAGGTGGAGGCGTGCATGCGAAGGGGGGAAACTTCTTCGAACCGACCATTCTGGTGG ATGTGCCTTCCAGTGCACGGGTGGCAAAGGAGGAGACTTTCGGCCCGCTGGCGCCGGTGTTCCGCTTCCATGATGACGCC GAGGTCATTGCCAGGGCCAACGATACTGAGTTTGGCCTCGCGGCTTACTTCTACACCGCCAACCTTGGCCGCGTATTCAG GCTTGGCGAAGCCTTGGAGTACGGCATCGTTGGCGTGAACACCGGCATCATCAGTTCCGAGGCGGCGCCATTCGGTGGCG TCAAGGCATCAGGCGTGGGGCGGGAGGGCTCCAAGTACGGGCTTGAGGACTATCTCGAGATCAAATACCTGTGCCTCGCA GGCATCTGA Protein sequence : MNLNNPQLLRQLAYIDGEWLAADNQATIDVLNPSTGALIGQVPRMGKAETRRAIESAERALPAWRERSAKDRANALRRWY DLIIANQHDLAQIMTLEQGKPLGEALGEITFGASYIEWYAEEAKRVYGDVIPGAADKRLLVLKQPVGVCAAITPWNFPSA MITRKAGPALAAGCTMVIKPASQTPFSALALVYLAEQAGIPPGVLSVVPGAAAEIAEELTSNPIVRKISFTGSTEIGREI MEKCAQDIKKISLELGGNAPFIVFDDADLDAAVEGALASKFRNAGQTCVCANRLYVHDKVYDAFVDKLAAAVGALKVGDG FADGVTLGPLIDGKAVAKVHEHIEDALAKGAKVVKGGGVHAKGGNFFEPTILVDVPSSARVAKEETFGPLAPVFRFHDDA EVIARANDTEFGLAAYFYTANLGRVFRLGEALEYGIVGVNTGIISSEAAPFGGVKASGVGREGSKYGLEDYLEIKYLCLA GI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-143 | 62 |
