Gene Information

Name : T1E_5215 (T1E_5215)
Accession : YP_006535830.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5671740 - 5672165 bp
Length : 426 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGCGCAGAACCAACCCGCAACGTGGCTTCACTCTGCTTGAACTCCTGGTGGTACTGGTAGTACTCGGCCTGCTGGC
CGGCATCGTCGCCCCCAAATACTTCAGTCAGCTAGGCCGCTCCGAGGCCAAGGTAGCGCGGGCGCAGATCGAGGGGCTGA
GCAAGGCCCTGGACTTGTACCGTCTGGAGGTCGGCCACTACCCCAACAGCGAACAAGGTTTGCAGGCGCTGGTGGTCGCG
CCCAGTGGCGAGGCTCGCTGGACCGGTCCGTACCTGCAGAAGGCCGTGCCGCAAGACCCGTGGGGCCGCGCTTACATCTA
CCGGCAACCTGGCGAGAACGGCGGTGAGTACGACCTGCTGTCGATGGGCAAGGACGGCCAGCCGGGTGGTGATGGGGAAA
ACGCCGAAATCACCAGTTGGCAGTAA

Protein sequence : 
MQRRTNPQRGFTLLELLVVLVVLGLLAGIVAPKYFSQLGRSEAKVARAQIEGLSKALDLYRLEVGHYPNSEQGLQALVVA
PSGEARWTGPYLQKAVPQDPWGRAYIYRQPGENGGEYDLLSMGKDGQPGGDGENAEITSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-19 43
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_5215 YP_006535830.1 general secretion pathway protein G VFG1871 Protein 1e-18 44
T1E_5215 YP_006535830.1 general secretion pathway protein G VFG0180 Protein 1e-18 43
T1E_5215 YP_006535830.1 general secretion pathway protein G VFG2050 Protein 6e-20 43