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Name : T1E_5165 (T1E_5165) Accession : YP_006535782.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis sensory transducer Function : - COG functional category : - COG ID : - EC number : - Position : 5621375 - 5622940 bp Length : 1566 bp Strand : + Note : - DNA sequence : ATGCGTAACAACCAGCCGATTACCCAGAGAGAACGGACTTTCCCTGCACAGCAGCGGTTGATCTCCACTACCAACGCCAA GGGTGTGGTCACCTACTGCAACGATGCCTTTATCGAAATCAGTGGATTCACCCGCGAGGAGCTGACTGGCGCACCGCACA ACCTGGTGCGTCACCCCGACGTACCGCCTGCCGTGTTTGCCCATATGTGGCAAACCCTCAAGCAGGGCCAGCCGTGGATG GGCATCGTCAAGAACCGCTGCAAGTCCGGCGACCATTACTGGGTCAACGCCTATGTCACACCCATCTTCGATAACAACCA GGTTGTCGGCTTCGAGTCGGTGCGGGTCAAGCCCACTGCCGAGCAGATCCGCCGCGCCGAGGCCCTGTACCAGCGCATCA ACCAGGGCAAGCCGCCGGTACCGCGCCGCGACAAGTGGCTGCCAGTGCTGCAGGACTGGCTACCGTTCATCCTGATCAGC CAGGTGGGCTTCCTGATCGGCAACTGGTTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGG CCTGCTCGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAAACCACTTCCGACCCACTGA TCGCGCAGATGTACACCGACAGCCGTGGCGTGCAGGCGCGCCTGGAAATGGCCATGCTCAGCCAGGACGCACGCATGAAA ACCTGCCTGACGCGCCTACAAGACAGTGCCGAACACCTGAGCGACCAGGCACGCCAGTCCGATGCCTTGGCGCACAAGAG CTCTACGGGGCTGGAGCGCCAGCGGGTGGAGACCGAGCAAGTCGCCGCTGCGGTAAACCAGATGGCCGCCACCACTCAGG AAGTGGCCAACCATGTGCAGCGCACCGCCGATGCCACCCAGGAAGCCAACCGCCTGACCAGCCAAGGCCGGCAAATTGCC GGAGAAACCCGCGAGGCCATCGAACGTCTGTCGGCGGCAGTGGGCGAGACCGGCCAGACGGTTACGCAACTGGCCAAAGA CAGCGACGAGATTGGTGGCGTGGTCGACGTGATCAAGGGCATCGCCGACCAGACCAACCTGCTGGCACTGAACGCAGCCA TTGAAGCGGCGCGCGCCGGTGAAATGGGCCGTGGTTTTGCCGTAGTGGCTGATGAAGTGCGTCAGTTGGCCCAGCGCACC GCCGAATCCACCGGGCAGATCCATGGCCTGATCGCCAAGCTGCAACAGACCGCCAGTAACGCAGTGCAGACCATGGAAGC CGGCCACCGCCAGGCACAGGAAGGCGTCGACCGGGTAATGCAGGCTGACGAGGCGTTGGTAGGCATCAGCGAAGCGGTGG CCAATATCACCGACATGGCCACCCAGATTGCAGCTGCAACCGAGGAGCAGACCGCAGTGGCTGACGAGATCAGCCGCAAC ATCAGCACCATTGCCGAACTGGCCGACCAGACCGCCGAACAGGCGCAGCACTCGGCACTGCTGAGCGAAGAACTGACCAG CACGGCGGGCAGCCAGTATTCGCTGGTGGAGCGCTTCAACCGCTGA Protein sequence : MRNNQPITQRERTFPAQQRLISTTNAKGVVTYCNDAFIEISGFTREELTGAPHNLVRHPDVPPAVFAHMWQTLKQGQPWM GIVKNRCKSGDHYWVNAYVTPIFDNNQVVGFESVRVKPTAEQIRRAEALYQRINQGKPPVPRRDKWLPVLQDWLPFILIS QVGFLIGNWLGHSWGFALAAGLSVPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGVQARLEMAMLSQDARMK TCLTRLQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAVNQMAATTQEVANHVQRTADATQEANRLTSQGRQIA GETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT AESTGQIHGLIAKLQQTASNAVQTMEAGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQTAVADEISRN ISTIAELADQTAEQAQHSALLSEELTSTAGSQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-68 | 41 |
