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Name : T1E_5159 (T1E_5159) Accession : YP_006535777.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : Rhs element Vgr protein Function : - COG functional category : - COG ID : - EC number : - Position : 5611510 - 5613687 bp Length : 2178 bp Strand : + Note : - DNA sequence : ATGCCCAGCCAATCCGATTTGCGCTTCACTTTCCAGCCGCTGGTTGGCCGAAGCGAGTTTGAGGTGGTGTCGTTCGAACT GGACGAAGCCATCAGCTCACCGTTCCAGCTGCAGCTGGAGCTGATCAGTTTCGAAGACGATGTCGACTTCGGCCAGCTCC TCGACAAACCGGTGCTGTTCACCCTCTGGCAGGGTGAGCGCCCGGTGCGCTACGTGCACGGACTGATCAGCACCTTCAGC CAAGGTGAAACAGGCTTCCATCGCACCCGTTACCGCGCACTGGTCGAGCCCATGCTGGCCCGCGCCGGGCTGCGCTCGAA CTGGCGCATCTTCCAGCAGAAAACCGTGCCGCAGATTCTCGAGATCATGCTCAAACGCCAGGGCGTGAATGCCTACGAGC TCAAGTGTCTCGACCCGCATCAGGTGCGCGAATTTTGCGTGCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTG GCCGCCGAGGAAGGCATTGTCTACCGCTTCGAACACACGCCGAAACAGCACTTGCTGGTCATCACTGACCGGCTGCTGGC GCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATC AGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTGCGA ACAGCGCGGCAGGTGCAACGGGACTACACCTTCACTCATCCGCAATACCGTCAGGAACACCAGGCGTACGACAATAGCAA CACCCATCAATCGCTGAACTATGAGCGCTTCGACTACCCCGGCCGATACAAGCGTGATGCGGTTGGGGTTCCGTTCACTG CCACCCGCCTTACGGCCCTGCGCCATGATGCGCGCATTGCCGAAGTGGAAGGCGACGATGTGCGCCTGCAACCGGGGCTG AGCTTCACCCTCATCGAGCACCCGCGTGAAGACCTCAACGTGCACTGGCGCACGGTCAGCGTGCATCACGAAGGCACCCA GTTCACCAGCCTGCAGGAAGAGGCCGCCGGCTCGCAGCAAGGCACCCGCTACAAACAGGACGCATTGCTGGTTCCCGGCA GGGCCGAATGGCGCCCGGCCCCCCTGCCCAAGCCACGCATTGACGGCCCGCACATGGCGACGGTGGTCGGGCCCAAGGGC GAGGAAATCTATTGCGACCAATGGGGCCGCGTGAAAGTGAGCTTTCCTTGGGACCGGGAAAGCGAAAACAACGAGTTCAG CTCCTGCTGGGTGCGCGTGTCGCAAGGTTGGGCGGGGGGCAGCTGGGGTTCGATGGCCATCCCGCGCATCGGCCAGGATG TGATCATCCAGTACGTCAACGCCGACCCGGACCAGCCGATGATCACCGGGCGCACCTATTGCGGTAACCAGTTGCCGCCC TATGACCTGCCCGAGCACAAGACGCGCATGACCATCAAGAGCCAGACCCATAAAGGCGAAGGCTTCAACGAGCTGCGCTT CGAGGATGAACTGGGTCGGCAGGAGGTGTTCATTCATGCCGAGCGGGACCAGAACAACATCGTCAAGCACGACGAAACCA CACGCGTGGGTAACGATCGTACCGAACGCGTCGAACGAGACGAGACGATTTCGATCGGTCAGGACCGTCGCGAAGACATC GCCCGTGACGAATCTGTTGGCATCGGCCAGAACCGGGTACACGAAATCGGCAACGACGACAGCCTGAGGATTGGTCGCAA CCACAGGATCACCACAGGCAAGGACCGAATCGAACAGGTAGGGAACCACCGGCAGGACATCACCAAGGCAAACCACACAG TAGAAATCGGCGGCCACCTCGAACAGGTCGTTGCCGGTCACAGCACGTTGCAAACGGGCGAAGCCATCCGGCACACCACC AAGGTTTATGACATCCAGGTCAGCGAAAGCCTGACGATCCGCAGCCCCGCGGGGCTTCTGAGGGTCGACGGCGCCGGTAT CACGCTGGACGGCTTGGCGCTGGCCTTCAAAGGGCCTGTCAGCCAGCAGGCTACGGGTAGCAATCGCGTCACTTCAACGT CTGGCGTACCAGCGCCGGGCGAACCCATTTGCCTCAGCTGCCTGCTCAAAGCGATCGCCGACGGCCACACCATCATTCGC ATGGAAGGAGCAAGCTGA Protein sequence : MPSQSDLRFTFQPLVGRSEFEVVSFELDEAISSPFQLQLELISFEDDVDFGQLLDKPVLFTLWQGERPVRYVHGLISTFS QGETGFHRTRYRALVEPMLARAGLRSNWRIFQQKTVPQILEIMLKRQGVNAYELKCLDPHQVREFCVQAGETDLDFMARL AAEEGIVYRFEHTPKQHLLVITDRLLALGQISRGAIKTDDEDEGFHNDDVGPDQVLYRSVGGGDQARPCLRRLRYSEQVR TARQVQRDYTFTHPQYRQEHQAYDNSNTHQSLNYERFDYPGRYKRDAVGVPFTATRLTALRHDARIAEVEGDDVRLQPGL SFTLIEHPREDLNVHWRTVSVHHEGTQFTSLQEEAAGSQQGTRYKQDALLVPGRAEWRPAPLPKPRIDGPHMATVVGPKG EEIYCDQWGRVKVSFPWDRESENNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQYVNADPDQPMITGRTYCGNQLPP YDLPEHKTRMTIKSQTHKGEGFNELRFEDELGRQEVFIHAERDQNNIVKHDETTRVGNDRTERVERDETISIGQDRREDI ARDESVGIGQNRVHEIGNDDSLRIGRNHRITTGKDRIEQVGNHRQDITKANHTVEIGGHLEQVVAGHSTLQTGEAIRHTT KVYDIQVSESLTIRSPAGLLRVDGAGITLDGLALAFKGPVSQQATGSNRVTSTSGVPAPGEPICLSCLLKAIADGHTIIR MEGAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 2e-112 | 42 |
