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Name : T1E_4867 (T1E_4867) Accession : YP_006535487.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : succinic semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 5314664 - 5316112 bp Length : 1449 bp Strand : + Note : - DNA sequence : ATGAATCTTGCCGATCACGATCTGCTGCGTGAAGTTTGCTACATCGACGGTAAATGGCAGCAGGCCGACAGCGGCCAGCG CATTGCCGTGACAGACCCAGCCACCGGTGAGGTGCTGGGCCATGTTCCGCGCATGGGCGCCGAGGAAACCCGCCGTGCCA TCGCTGCCGCCGAGCGCGCTTTGCCGGCCTGGCGTGCGCTTACCGCCAAGGAGCGCGCCGCGAAGCTGCAAGCCTGGTTC CGTGAGATCCTTGCCCACCAGGAAGACCTGGCGCGCATCATGACCGCCGAGCAGGGCAAGCCGCTGGCCGAGTCCCGTGG CGAAATCGCCTTTGCCGCAGCCTACGTGGAGTTCTACGCAGAGGAAGGCAAGCGCATTTACGGGGATGTGATCCCGTCGC CGAACGCCGACCGCCGCCTGCTGGTAACCAAAGAGCCGATTGGCGTGTGCGCGGCGATCACGCCGTGGAACTTCCCGGCG GCGATGATCACCCGCAAGGCCGCGCCGGCACTGGCCGCAGGCTGCACCCTGGTGCTCAAGCCGGCTTCGCAGACGCCGTT CAGCGCCCTGGCACTGTGTGTGCTGGCAGAGCGCGCAGGCATTCCTGCGGGCGTGCTGAGCGTGGTGACCGGCGATTCGG CAGCAATCGGCGGCGAGCTGACCGCAAGCCTGGTGGTGCGCAAGCTGTCGTTCACTGGATCCACGCCCATCGGTATCCAG CTGCTGCAGCAGTCGGCGGCCACGGTAAAGAAGGTGACCATGGAGCTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCCGACCTGGAAAAGGCCGTGGACGGTGCGCTGATCGCGAAGTTTCGCAACAGTGGGCAAACCTGCGTGTGCGCCAACC GCTTCTACATCCAGGACGGTATCTATGAGCGCTTTGTGGCGCGCTTTGCCGAGCGGGTGAACGAGTTGGTGGTGGGGCAG GGCGATGCTGCTGGCACCCAGGTTGGGCCGATGATCGACGGGCGTGCTGCGCGTGGCGTCGAGCAGTTGGTGGGTGAGGC GATTGAGGCCGGTGCGCGAGTGGTGACCGGTGGGCGTCGGCATGCGCTGGGGGAGGCGTTCTTCGAACCGACCTTGCTGG CCGATGTGACGGCAGGCATGCGCGTGGCGCGTGAAGAGATTTTCGGGCCGGTGGCGCCGATTTTCCGCTTCAGCACCGAG CAGGAAGTGATCGCCCAGGCCAACGACACCGAATTCGGCCTGGCGTGCTACGCCTATACCCAGGATGTGGGGCGCGTGTG GCGGGTGTCCGAGGCGCTGGAGTACGGCATGGTGGGCATCAACGTTGGCGTTGTGGCCACCGAAGTGGCGCCGTTTGGTG GGGTGAAGGCGTCCGGGTTGGGTCGGGAAGGGTCGCGGTACGGGATCGAGGATTACCTAGAGATCAAGTACGTGTGCCTG GGCCTCTAG Protein sequence : MNLADHDLLREVCYIDGKWQQADSGQRIAVTDPATGEVLGHVPRMGAEETRRAIAAAERALPAWRALTAKERAAKLQAWF REILAHQEDLARIMTAEQGKPLAESRGEIAFAAAYVEFYAEEGKRIYGDVIPSPNADRRLLVTKEPIGVCAAITPWNFPA AMITRKAAPALAAGCTLVLKPASQTPFSALALCVLAERAGIPAGVLSVVTGDSAAIGGELTASLVVRKLSFTGSTPIGIQ LLQQSAATVKKVTMELGGNAPFIVFDDADLEKAVDGALIAKFRNSGQTCVCANRFYIQDGIYERFVARFAERVNELVVGQ GDAAGTQVGPMIDGRAARGVEQLVGEAIEAGARVVTGGRRHALGEAFFEPTLLADVTAGMRVAREEIFGPVAPIFRFSTE QEVIAQANDTEFGLACYAYTQDVGRVWRVSEALEYGMVGINVGVVATEVAPFGGVKASGLGREGSRYGIEDYLEIKYVCL GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 9e-129 | 63 |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 7e-62 | 45 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 2e-56 | 43 |
