Gene Information

Name : rph (T1E_4709)
Accession : YP_006535330.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5147556 - 5148278 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGTCCAAGTGGTCGCGTTGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAGCACGCCGAAGG
GTCGGTACTGGTCGAGTTCGGTGACACCAAAGTCATCTGCACGGTCAGCGTTGAAAACGGTGTACCGCGCTTCCTCAAAG
GCCAGGGCCAAGGCTGGCTGACCGCCGAGTATGGCATGCTGCCGCGCTCCACCGGCGAACGTAACCAGCGCGAAGCCAGC
CGTGGCAAGCAGGGCGGCCGCACCCTGGAAATCCAGCGCCTGATCGGCCGTTCGCTGCGTGCCGCGCTGGACATGAGCAA
GCTCGGTGACATCACCCTGTACGTCGATTGCGACGTGATCCAGGCCGATGGCGGTACCCGTACCGCGTCCATCACCGGCG
CCATGGTTGCCTTGTGCGATGCTTTGGCAGTGATCAAGAAGCGCGGCGGCCTCAAGGGCGGCAACCCGCTCAAGCACATG
ATCGCTGCCGTATCGGTAGGCATGTACCAGGGCGAAGCGGTGCTCGACCTGGACTACCTGGAAGACTCCGCAGCCGAAAC
CGACCTGAATGTGGTCATGACCAGCGCTGGTGGTTTCATCGAAGTGCAGGGTACTGCTGAAGGCGCACCGTTCCAGCCGG
AAGATTTCAACGCCATGCTCGCCCTGGCGCAGAAGGGCATGAACGAGATTTTCGAGCTGCAGCAGGCGGCACTGGCTGAC
TGA

Protein sequence :
MKRPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREAS
RGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHM
IAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMNEIFELQQAALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-64 59