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Name : T1E_4567 (T1E_4567) Accession : YP_006535189.1 Strain : Pseudomonas putida DOT-T1E Genome accession: NC_018220 Putative virulence/resistance : Unknown Product : Rhs element Vgr protein Function : - COG functional category : - COG ID : - EC number : - Position : 4991264 - 4993432 bp Length : 2169 bp Strand : - Note : - DNA sequence : ATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAACGCTGAGTTCGAAGTGGTGTCGTTCGAACT ACGAGAAGGGATCAGCACACCCTTCGAACTGGAGCTGAAATTGATCAGCTTCGAGAACGATATCGACTTCGGCCACCTGC TCGACAAACCGGTGCTCTTCACCATCTGGGAAGGCGGACGCCCAGTACGCTACGTGCACGGTCTGGTCAGTCGTTTCAGC CAAGCGGAAAGTGGCTTCTACCGCACCTACTATGACGCGCTGATCGAGCCACAGCTGGCCCGTGCCAGCCTGCGTTCGAA CTGGCGCATCTTCCAGCAGAAGACCGTGCCGCAAATTCTTGAACTGATGCTCAAGCGCCAGGGCATCGACCAGTACGCAC TACGCGCCAGCCTGGACCACCAGGTGCGCGAATTCTGCGTTCAGGCCGGCGAAACCGACCTCGACTTCATCGCCCGCCTG GCGGCCGAAGAAGGCTTTGTCTACCGCTTCGAGCACAATGAAAAACGCCATAAGCTGATCATCACCGACAGACTGCAGTC ACTCGGTCTGATAAGTCACGGTGTCATCAAACACGAGGACGACGCCGAAGGCTTCTACCGTGAGCGTGAACCGTCAGCCC CAGACACCGTGCTGTACCATTCCAACCACGGCGGCGACCAGCCTCAACCGTGCCTACGGCGCTTGCGCTACAGCGAACAG GTGCGTACTGCACGGCAGGTTCAACGCGACTACACCTTCACCCACCCGGCCTATCATCAGGAACACAGGGCCTCGGGCCC GTATCTTGAGCACCAGTCCACGGACTATGAGTGCTTCGACTACCCCGGCCGTTACAAACGCGATGCCGTTGGCAAGCCGT TCACCGAAAACCGCATCACCGGCTTGCGCCATGACGTGCGTATTGCCCAAGTGCAAGGCGACGATGTGCGCTTGCAACCA GGCCTGAGCTTCACCCTGACAGGCCACCCGCGCGAAGACCTGAATGTGCATTGGCGGGTCAGCACGGTTCGCCACGAAGG CAGCCAGTTCACCAGCCTGCAGGAAGAAGCTGCCGGGGCCGACCAGGGCACACGTTACGAGCAAAAGGCGGTACTGGTGC CAGGCAGAGCCGAGTGGCGCCCAGCCCCGTTGCCCAAACCACGCGTTGACGGCCCGCACATGGCCACCGTGGTGGGGCCG CCCGGTGAAGAGATCTACTGCGACGAATGGGGCCGGGTCAAGGTCAGCTTCCCCTGGGACAGAGAAAGCCAGGACAACGC GTTCAGTTCCTGCTGGGTACGCGTATCCCAAGGCTGGGCCGGCGGCAGCTGGGGCTCGATGGCCATCCCACGGATTGGCC AGGACGTGATCATCCACTACGTCAACGGCGACCCCGATCAGCCGATGATCACCGGCCGTACTTACTGCGGTAACCAGCTG CCACCGTACGACCTTCCCCGTCACAAGACCCGCATGACCATCAAGAGCCAGACCCACAAGGGCGATGGCTTCAACGAGCT GCGCTTCGAGGACGAACTGGGCCAGGAGGAAGTGTTCATTCATGCCCAGAGGGACCAGAACAATGTGGTCAAGCACGATG AGACTACGCAGGTCGGCAATGACCGCAAAGAGCAGGTCGATCACGACGAATCGATCCTGATCGGCCACGACCGTACGGAA ACGGTTGGCAATGACGAGCACATCACCATCGGGCAGGACGCCGCGCTCGACATCGGCAGAAACCACACGATCAGGATCGC CAAGGACCGTGTCGAAAACATCGGCAATCACCGTCACGACCAGATCGCCGCCAATCACCACACCCGTATCGGTGGCAACT TCGAGCAACGGGTCGAAGGGCATGCCGAGCTGGAAGCCCGTGGGGATATCCGCAGACGTACTCGCCGTTATGAACTTCGA GCATCGGAAGCCGTGGTCATCCAAGGCCCTGGGGGCTCCATTCGAATCGACGAAACAGGCATCACCCTGGACAGCCCGAC GATTCGCATCACCGGCCAGATGCTCAAGTCGGCAAATGGGACGACAAGCCCCTTTTCCATCAGCAGTGCCCCGAACACCG GCAAGCCTCTGGAGCGCTTGTGTGGGCGCCGCCCTGATGGTTCCTGCCCCCTGCCCGATTGCCGCTGTATCCGAGGGCCA GTCCAATGA Protein sequence : MPSQSDLRYSFEALVGNAEFEVVSFELREGISTPFELELKLISFENDIDFGHLLDKPVLFTIWEGGRPVRYVHGLVSRFS QAESGFYRTYYDALIEPQLARASLRSNWRIFQQKTVPQILELMLKRQGIDQYALRASLDHQVREFCVQAGETDLDFIARL AAEEGFVYRFEHNEKRHKLIITDRLQSLGLISHGVIKHEDDAEGFYREREPSAPDTVLYHSNHGGDQPQPCLRRLRYSEQ VRTARQVQRDYTFTHPAYHQEHRASGPYLEHQSTDYECFDYPGRYKRDAVGKPFTENRITGLRHDVRIAQVQGDDVRLQP GLSFTLTGHPREDLNVHWRVSTVRHEGSQFTSLQEEAAGADQGTRYEQKAVLVPGRAEWRPAPLPKPRVDGPHMATVVGP PGEEIYCDEWGRVKVSFPWDRESQDNAFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIHYVNGDPDQPMITGRTYCGNQL PPYDLPRHKTRMTIKSQTHKGDGFNELRFEDELGQEEVFIHAQRDQNNVVKHDETTQVGNDRKEQVDHDESILIGHDRTE TVGNDEHITIGQDAALDIGRNHTIRIAKDRVENIGNHRHDQIAANHHTRIGGNFEQRVEGHAELEARGDIRRRTRRYELR ASEAVVIQGPGGSIRIDETGITLDSPTIRITGQMLKSANGTTSPFSISSAPNTGKPLERLCGRRPDGSCPLPDCRCIRGP VQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 3e-107 | 41 |
