Gene Information

Name : T1E_4523 (T1E_4523)
Accession : YP_006535146.1
Strain : Pseudomonas putida DOT-T1E
Genome accession: NC_018220
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4927867 - 4929387 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTTATGCACATCCCGGTACCGAAGGCGCGAAGGTTTCCTTCAAGAGCCGCTACGGCAACTACATCGGTGGTGAGTT
CGTTACTCCGGTAAAGGGGCAGTACTTCGAAAATACCTCCCCGGTGAATGGCAAGCTGATCGCTGAATTCCCCCGCTCTA
CTGCCGAAGACATCGAGAAGGCCCTGGATGCCGCCCATGCTGCGGCCGACGCCTGGGGCCGCACTTCAGTGCAGGATCGT
TCCAACGTGCTGCTGAAGATCGCCGACCGTATCGAGCAGAACCTCGAATTGCTGGCCATTACCGAAACCTGGGACAACGG
CAAGCCGATCCGCGAAACCCTCAACGCCGACATTCCGCTGGCGGTCGACCACTTCCGCTATTTCGCTGGCTGCATCCGCG
CCCAGGAAGGCGGCGCTGCCGAAATCAATGAAGGCACCGTGGCCTACCACATCCACGAGCCACTGGGCGTGGTCGGGCAG
ATCATCCCCTGGAACTTCCCGATCCTGATGGCTGCCTGGAAGCTTGCCCCGGCACTGGCCGCTGGTAACTGCGTGGTGCT
CAAGCCTGCCGAACAGACGCCGCTGGGCATCACCGTGCTGCTCGAAGTCATTGGCGACCTGTTGCCACCTGGCGTGCTCA
ACGTAGTGCAAGGCTATGGCCGCGAAGCCGGTGAAGCCCTGGCCACCAGCAAACGCATCGCCAAGATCGCCTTCACCGGC
TCTACCCCGGTCGGCGCGCACATCATGAAATGCGCCGCCGAGAACATCATCCCGTCCACCGTCGAACTGGGTGGCAAGTC
GCCGAACGTGTACTTCGAAGACATCATGCAGGCCGAGCCAAGCTTCATCGAGAAGGCGGCAGAAGGCATGGTGCTGGCGT
TCTTCAACCAGGGTGAAGTGTGCACCTGCCCGTCGCGAGCCCTGGTGCAAGAGTCGATCTATCCGCAGTTCATGGAAGTG
GTGATGAAGAAGGTGCTGCAGATCAAGCGCGGCGACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCCTCGCAGCA
GCAGTTCGAAAAGATCCTCTCGTACCTGCAGATCGCCCAGGACGAAGGCGCCGAGTTGCTCACCGGCGGCAAGGTCGAGA
AGCTGGAAGGTTCGCTGGCTACCGGTTACTACATCCAGCCGACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTCAGCGTCACCACCTTCAAGGACGAAGCCGAAGCACTGGCGATTGCCAACGACACCGA
GTTCGGCCTGGGCGCCGGTGTGTGGACCCGCGACATCAACCGTGCCTACCGCATGGGCCGCGGCATCAAGGCTGGCCGTG
TGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCCGCGTTCGGCGGTTACAAGAAGTCGGGGGTTGGGCGTGAGACG
CACAAGATGATGCTGGATCACTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGTTGGGCTTCTTCTA
G

Protein sequence : 
MRYAHPGTEGAKVSFKSRYGNYIGGEFVTPVKGQYFENTSPVNGKLIAEFPRSTAEDIEKALDAAHAAADAWGRTSVQDR
SNVLLKIADRIEQNLELLAITETWDNGKPIRETLNADIPLAVDHFRYFAGCIRAQEGGAAEINEGTVAYHIHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGITVLLEVIGDLLPPGVLNVVQGYGREAGEALATSKRIAKIAFTG
STPVGAHIMKCAAENIIPSTVELGGKSPNVYFEDIMQAEPSFIEKAAEGMVLAFFNQGEVCTCPSRALVQESIYPQFMEV
VMKKVLQIKRGDPLDTDTMVGAQASQQQFEKILSYLQIAQDEGAELLTGGKVEKLEGSLATGYYIQPTLLKGNNKMRVFQ
EEIFGPVVSVTTFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-152 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-159 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-159 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-159 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-159 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
T1E_4523 YP_006535146.1 aldehyde dehydrogenase VFG0082 Protein 2e-152 66